Dickeya fangzhongdai DSM 101947: CVE23_18200
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Entry
CVE23_18200 CDS
T05277
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CVE23_18200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfn02000
]
CVE23_18200
Transporters [BR:
dfn02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CVE23_18200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
Phosphonate-bd
RMI2
Motif
Other DBs
NCBI-ProteinID:
ATZ95729
UniProt:
A0A2K8QQC6
LinkDB
All DBs
Position
complement(4052766..4053818)
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AA seq
350 aa
AA seq
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MKKLLSSVLISSALFSTAVMAQDLAALEKAARAEGEVNSVGMPDSWANWKDTWDDLSAKY
GLKHSDTDMSSAQEIAKFAAEKENASADIGDVGVAFGPVAVQKGVSQPYKPTTWEQVPDW
AKDKDGHWAMAYTGTIAFIVDKQQVKDIPHSWADLQKGKYVVTIGDVGTASQASSGVLAA
SFALGGNEKNLKPALDFFAKLAKEGRLGLTNPAIANIEKGEVQVGVVWDFNGLNYRDKIN
KDRFEVLIPSDGSVISGYTTIINKYAKHPNAAKLAREYIFSDAGQINLARGYARPIRAQH
ITLPDDVKAKLLPQEQYKNAHPIADAEAWDKTVKALPRLWQENVIINMKQ
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattgttgtcttctgtattaatcagcagcgcgttattttcgaccgcggtcatg
gcgcaggatctggcggcgctggaaaaagccgcccgcgccgagggcgaagttaacagcgtc
ggcatgccggacagctgggccaactggaaagatacctgggacgatttgagcgccaaatat
ggcctgaaacacagcgataccgacatgtcttccgcgcaggagatcgccaagttcgccgcc
gagaaagagaacgccagcgcggatatcggcgacgtgggcgtggccttcggccctgtagcg
gtgcagaaaggcgtgagccagccgtacaagccgaccacctgggaacaggtgccggactgg
gcgaaagacaaagacggccactgggcgatggcctataccggcaccattgcgtttatcgtc
gataaacagcaggtaaaagacattccgcatagctgggcggatctgcaaaaaggcaaatac
gtggtgaccatcggcgacgtcggcaccgcgtcccaggcctccagcggcgtgctggcggcc
agtttcgcgctgggcggcaacgagaagaacctgaaaccggcgctggatttctttgccaaa
ctggcgaaagaaggccgcctcggtctgaccaacccggctatcgccaatatcgagaaaggc
gaagtgcaggtgggcgtggtgtgggacttcaacggcctgaactaccgcgacaagatcaac
aaggatcgcttcgaggtattgatcccgtctgacggttcggtgatctccggctacaccacc
atcatcaacaaatacgccaaacacccgaacgccgccaaactggcgcgcgagtacatcttc
tccgacgccggtcagatcaacctggcgcgcggctacgctcgcccgatccgcgcccagcac
attaccctgccggatgacgtgaaagccaaactgctgccgcaggaacagtataaaaacgcg
catccgatcgccgacgccgaagcctgggacaagacggtgaaagcgctgccgcgtctgtgg
caggaaaacgtcattatcaacatgaagcagtaa
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