Dickeya fangzhongdai DSM 101947: CVE23_18925
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Entry
CVE23_18925 CDS
T05277
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00061
Fatty acid biosynthesis
dfn00071
Fatty acid degradation
dfn01100
Metabolic pathways
dfn01212
Fatty acid metabolism
dfn02024
Quorum sensing
dfn04146
Peroxisome
Module
dfn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CVE23_18925
00071 Fatty acid degradation
CVE23_18925
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CVE23_18925
09145 Cellular community - prokaryotes
02024 Quorum sensing
CVE23_18925
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dfn01004
]
CVE23_18925
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dfn04147
]
CVE23_18925
Enzymes [BR:
dfn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CVE23_18925
Lipid biosynthesis proteins [BR:
dfn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CVE23_18925
Exosome [BR:
dfn04147
]
Exosomal proteins
Exosomal proteins of breast milk
CVE23_18925
Exosomal proteins of breast cancer cells
CVE23_18925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Glyco_transf_21
Motif
Other DBs
NCBI-ProteinID:
ATZ95861
UniProt:
A0A2K8QQS5
LinkDB
All DBs
Position
complement(4229987..4231792)
Genome browser
AA seq
601 aa
AA seq
DB search
MKTNSLSHYHLVHRIQQQIAQRPNALAFREWAPEQEQQLDWHQVGERIRRIACGLLGLGV
DVQERVAIFSDNAITWSLADLALLHLRAITVPLYATSAAAQASFILNDADIRTVFVGGQA
QFDLLMSLRDSCPQLRTIILLDEQIRRRGCDIAVSLEEFEAQAELSVWEPVLRQRVADRD
LSDLFTLIYTSGTTGEPKGVMLDYANMATQLVLHDGRLQTSEQDVSLCFLPLSHVFERAW
SFFIMHRGAQNVYLRDTDQVRAAMAAVSPTVMCAVPRFYEKVFSAIHEKVAQAPWHRRTL
FHWGIAQGHKRFLRRQDGKRAGVWNALTYRLADRLVLSRLRQLLGGKVRFLPAAGARLDD
NIIAFFQAMGVRIVYGYGLTETCATVSCWEADHYRLGSVGTPLPGIDVRIGEQNEIQVRG
ATVMRGYYRRPQDTEAAFTPDGWFKTGDVGEVDANGNLFITERLKDLMKTSGGKYIAPQH
LEGALGQDRFIEQVAVIADARKYVSALIVPCFEALEEYARSINLGYQDRLELLRHNHILS
LFEQRLRDVQKEFARFEQVKKFTLLPAPFSQEEGELTPTLKLRRKVIHQRYQLEIEAMYA
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgaattcactctcgcactaccatctggttcaccgtattcagcagcaaattgct
cagcgccctaacgcgctggcgtttcgcgaatgggcgcctgaacaggaacagcagctcgac
tggcatcaggtaggcgagcgtatccgccgcattgcctgcggcctgctggggctgggcgtt
gatgttcaggaacgggtggcgatcttttccgacaacgccatcacctggtcgctggcggat
ctggcgttgctgcacctgcgggcgattaccgtaccgctgtatgccaccagcgcggcggcg
caggcgtcgttcattctgaatgacgcggatatccgtaccgtttttgtcggcggtcaggcg
cagtttgatctgctgatgtcgctgcgcgacagctgtccgcaactgcgcaccattattctg
ctggatgagcagattcgccgtcgcggttgcgacatcgcggtatcgctggaggaatttgaa
gcgcaggcggagttgtcggtgtgggagccggtgctgcgccaacgggtggccgatcgggat
ttgagcgatctgtttacgttgatctacacctccggcaccaccggcgagcccaaaggggtg
atgctggattatgccaacatggcgacccaactggtgctgcatgatgggcggctgcagacg
agcgaacaggacgtatcgctgtgctttttaccgttgtcgcatgtcttcgaacgcgcctgg
agcttcttcatcatgcaccgcggcgcgcagaacgtgtacctgcgcgacaccgatcaggtc
cgtgcggcgatggcggcggtcagccctaccgttatgtgcgcggtgccgcgtttctacgag
aaagtgttcagcgccatccatgagaaagtggcgcaggcgccgtggcaccggcgcacgttg
tttcactgggggatcgcccagggccataaacggtttttacgccggcaggatgggaaacgc
gccggagtgtggaacgcgctgacgtatcgtcttgccgatcggctggtgctgtcgcgtctg
cgccagttgctgggaggaaaggtccgttttctgccggcggcgggtgcgcgtctggatgac
aatatcatcgcctttttccaggcgatgggcgtccgtatcgtttatggttacggcctgacg
gagacctgcgccaccgtgtcctgctgggaagccgaccactaccggttggggtcggtcggg
acgccgctgccgggcatcgatgtgcgcatcggcgaacaaaatgaaatccaggtgcgcggc
gccaccgtgatgcgcggctactatcgccgcccacaggatacggaagccgcctttacgccg
gatggctggttcaaaaccggcgatgtgggcgaggtggacgccaatggcaacttgttcatc
accgaacgccttaaggatctgatgaaaacctcgggcggcaaatacattgcgccgcaacat
ctggaaggcgcgttgggacaggatcgcttcattgaacaggtggcggtgatcgccgacgcg
cgcaagtacgtctccgcgctgatcgtcccctgctttgaggcgctggaggagtatgcccgt
tcgatcaatctggggtatcaggatcgattggagttgttgcgccataaccatatcctgtcg
ctgtttgaacagcggttgcgcgatgtgcaaaaagagttcgcgcgttttgaacaggtgaag
aaatttaccctgctgcctgcgccgtttagtcaggaagaaggcgaactgaccccgacatta
aaactccgccgcaaggtcattcatcagcgttatcagctggaaatcgaggccatgtacgcc
gactag
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