Dickeya fangzhongdai DSM 101947: CVE23_19080
Help
Entry
CVE23_19080 CDS
T05277
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfn03021
]
CVE23_19080
Transcription machinery [BR:
dfn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CVE23_19080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_34
Cas3-like_C_2
COG2_N
ASY3-like
Motif
Other DBs
NCBI-ProteinID:
ATZ95887
UniProt:
A0A2K8QQV3
LinkDB
All DBs
Position
4261191..4264094
Genome browser
AA seq
967 aa
AA seq
DB search
MPFTLGQRWISDTESDLGLGTVVAMDARMVTLLFPASGENRLYSRNDAPITRVMFNPGDT
VTSHESWQLRVEDVRDENGLRTYIGQRLDTDEPAELREVFLDSKLTFNKPQDRLFAGQID
RMDRFALRYRAHRHQLEQALQPWGGLRGMRASLIPHQLHIAREVGQRHAPRVLLADEVGL
GKTIEAGMIIHQQLLAGRAERVLIVVPETLQHQWLVEMLRRFNLLFSLFDDERYAEARLD
SDNPFETEQLIICSLDFVRRNPSRFEQLLDADWDLLVVDEAHHLVWSEAAPSAGYKAVER
LARAIPAVLLLTATPEQLGQESHFARLRLLDPNRFHDYHEFIAEQQQYRPVADAVTLLLS
GNSINDSDRNALGDMLGEQDIEPLLKSIASDSDDSAAARQELITMLMDRHGTSRVLFRNT
RQGVKGFPKRELHQIKLPLPTQYQTAIRVSGIMNARKSAEDCARDMLYPEQIYQQFEDDN
ATWWSFDPRVEWMLDFLTSHRDEKVLVICAKAATALQLEQVLRTREAIRAAVFHEGLSIL
ERDRAAAYFASAEEGAQVLICSEIGSEGRNFQFASHLIMFDLPFNPDLLEQRIGRLDRIG
QSRDIQILVPYLENTAQALLVRWYHEGLDAFEHTCPTGRSIYDSHYEQLINLLAKPSEQT
GLDEFIHTCRQQHDALKTQLEQGRDRLLEMHSNGGEQAQALAEAIAKQDNDVNLVNFALN
LFDIIGIHQDDRSDNLIVLTPSDHMLVPDFPGLPQDGCTITFDRDQALSREDAQFVSWEH
PLIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKKLQLTRFLPPTPI
RVLLDRKGTNLAAQVEFESFNRQLSSVNRHTSSKLVNAVQDDVHDMLQKAQPLVEAQAQA
LIADAQRNAETQLRREQERLEALKAVNPNIRDDELEALAEQREQVLLNLQQANWRLDAIR
LVVVAHQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgatttaggattgggt
acggtagtggcgatggatgcccgcatggtcactctgctgtttccggccagtggcgaaaac
cgtctctattcaagaaatgacgcccccattacccgtgtcatgttcaatcccggcgatacc
gtcaccagccacgaaagctggcagttacgggtggaggacgtgcgtgacgagaatggtctg
cgcacctatatcggccagcggctggacaccgatgaacccgccgaactgcgggaagtgttc
ctcgacagcaagctgacgttcaataagccgcaggatcggctgttcgccggtcaaatcgac
cgaatggatcgctttgcgctgcgttaccgcgcgcaccgtcaccagctcgaacaggcgttg
cagccgtggggcggactgcgcggcatgcgcgccagcctgattccgcaccagttgcatatc
gcccgcgaagtgggccagcgccatgcgccgcgcgtgctgttggcggacgaagtggggctg
ggcaaaaccattgaagccggcatgattatccaccagcagttgctggcgggccgggcggaa
cgcgtgctgatcgtggtgccggaaacattacagcatcagtggctggtggagatgctgcgc
cgcttcaacctgctgttctcgctgttcgacgacgagcgctacgccgaagcccgccttgac
agcgacaacccgtttgaaaccgagcagttgatcatctgttcgctggattttgtacgccgc
aacccgtcccgtttcgaacaactgctggacgccgactgggacctgctggtggtggacgaa
gcgcaccatctggtatggagcgaagccgcgcccagcgccggatacaaggcggtcgagcgt
ctggcgcgcgccatccccgcggtgctgttgctgaccgcgacgccggaacaattgggtcag
gagagccactttgcccgtctgcggctgctcgatccgaaccgtttccatgactaccacgag
tttatcgccgaacaacagcaataccgcccggtggccgacgcggtcaccctgttgctgagc
ggcaacagcatcaacgacagcgatcgcaacgcgctcggcgacatgctgggcgagcaggat
atcgagccgctgctgaagtccatcgccagcgacagcgacgacagcgccgcggcgcgtcag
gaactgatcaccatgctgatggaccgccacggcaccagccgcgtgctgttccgcaacacc
cgtcagggggtgaaaggcttcccgaaacgcgaactgcatcagatcaagctgccgttgccg
acgcagtaccagacggcgatccgcgtgtccggcatcatgaatgcccgcaaatccgctgaa
gactgcgcgcgcgacatgctctatccggagcagatctatcagcaatttgaagacgacaac
gccacctggtggagtttcgatccgcgcgtcgaatggatgctggattttctgaccagccac
cgcgacgagaaggtgctggtgatctgcgccaaggcggccaccgcgctgcaacttgagcag
gtgctgcgcacccgcgaagccatccgcgccgcggtgttccacgaagggctgtcgattctg
gaacgcgaccgcgccgccgcgtacttcgcttccgcagaggaaggcgcgcaggtgctgatc
tgttccgagatcggttccgaaggccgcaacttccagttcgccagtcacctgatcatgttt
gatctgccattcaacccggatctgctggaacagcgcatcggtcgactggatcgtatcggc
cagagccgcgatatccagattctggtgccctatctggaaaacaccgctcaggcgctgctg
gtacgctggtaccacgaagggctggatgcgttcgagcacacctgcccgaccggccgctcg
atttacgacagccactacgagcaattaatcaacctgctcgccaaaccgtccgaacagacg
ggactggacgagttcatccacacctgtcgccagcagcatgacgcgctgaagacccaactg
gaacaaggccgcgaccgcctgctggagatgcattccaacggcggcgaacaggctcaggcg
ctggccgaagcgatcgccaagcaggataacgacgtcaatctggtgaatttcgccctcaac
ctgttcgacatcatcggtattcatcaggacgaccgcagcgataacctgatcgtgctaacg
ccgtccgatcatatgctggtgccggatttccccggcctgccgcaggacggttgcaccatc
accttcgaccgcgatcaggcgctgtcccgcgaggacgcgcagttcgtcagttgggaacac
ccgctgatccgcaacggtctggatctgatcctgtccggcgacaccggcagttgcgccgtg
tcgctgctgaaaaacaaggcgctgccggtcggcaccctgctggcggaactggtatacgtg
gtagaagcgcaggcgccgaagaaattgcagttgactcgcttcctgccgccaacgccgatt
cgcgtgctgctggaccgcaaaggcaccaatctggcggcgcaggtggaattcgagagcttc
aaccgccaactgagttcggtcaatcgccacacttccagcaaactggtgaatgcggtgcag
gacgatgtgcatgacatgctgcagaaagcccaaccgttggtggaagcgcaggcgcaagcg
ctgatcgccgacgcgcagcgcaacgccgaaacgcagctgcgccgcgaacaggagcggctg
gaagcgctcaaggcggtcaacccgaacatccgtgacgacgaactggaggcgctggcagaa
cagcgcgaacaggtgctgctcaacctgcagcaggccaactggcgtctggatgccatccgt
ctggtggtggtggcgcaccagtaa
DBGET
integrated database retrieval system
