Dickeya fangzhongdai DSM 101947: CVE23_19650
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Entry
CVE23_19650 CDS
T05277
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CVE23_19650 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dfn03000
]
CVE23_19650 (nifA)
Transcription factors [BR:
dfn03000
]
Prokaryotic type
Helix-turn-helix
Other families
CVE23_19650 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF_2
AAA_5
GAF_3
AAA
AAA_2
Mg_chelatase
AAA_3
AAA_16
HTH_23
bpMoxR
TIP49
Motif
Other DBs
NCBI-ProteinID:
ATZ95992
UniProt:
A0A2K8QRF3
LinkDB
All DBs
Position
complement(4393703..4395274)
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AA seq
523 aa
AA seq
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MTQAPDTGNVVWRFDLSQQFTAVQRISAALSRATDIGQALQAVLRVLHDDAFMQHGMICL
YDPQRGGLRVEALYCEDQRVLSSSSQVCYRPGEGLVGTVMTQRQPLTLPRVADDQRFLDR
LNLYDYELPFIGVPLLGIEQQPIGVLAAQPMARYEERLPASTRFLETVASLIVQTVRLMR
APRRDGESPSAASRPAACKTPRPFGFDNMVGKSAAMRQTMEIIRQVSRWDTTVLVRGESG
TGKELVANAIHYNSPRAAAPFVKFNCAALPDNLLESELFGHEKGAFTGAVRQRKGRFELA
DGGTLFLDEIGESSASFQAKLLRILQEGEMERVGGDETLRVNVRIIAATNRHLEEEVRAG
HFREDLYYRLNVMPVSLPPLRERQEDIVELAQFLVKKIAAHQGRALRISDGAIRLLMGYN
WPGNVRELENCLERAAVMTDTGLIDRDVILFNHHDAAPMMNKPTPPAAAEEGWLDQNLDE
RQRLIAALEKTGWVQAKAARLLGMTPRQVAYRIQIMDINMHRL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggcacccgatacggggaacgtcgtatggcgttttgatttgtctcagcagttt
accgcggtgcagcgcattagcgcggcgctgagccgggccaccgacatcgggcaggcgtta
caggcggtgttgcgggtgctgcatgatgatgccttcatgcagcacggcatgatttgcctg
tatgacccgcagcgcggcgggctgagagtggaagcgctgtactgcgaggatcagcgggtc
ctgtccagcagcagccaggtgtgttaccggccgggcgaagggctggtgggcacggtgatg
acccagcgtcagccgctgacgctgccgcgcgtggcggacgatcagcgttttctcgaccgg
cttaatctgtatgactacgagctgccgtttatcggcgtgccgttgttgggcatcgaacaa
cagccgatcggcgtgctggcggcccagccaatggcgcgctacgaggaacgcctgccggct
agcacccgttttctggaaacggtggctagcctgatcgtgcagacggtgcggctgatgcgc
gccccccggcgcgacggcgaatcaccgtcggcggcgagccgcccggccgcctgtaaaacg
ccgcggccgttcggttttgacaacatggtggggaaaagcgcggcgatgcgccagacgatg
gagatcatccgtcaggtgtcgcgctgggacaccacggtgctggtgcgcggcgagagcggc
accggtaaagagctggtggcgaacgccatccactacaattcgccgcgcgcggcggcgccg
ttcgtgaaattcaactgcgcggcgctgccggataacctgctggaaagcgaactgttcggc
catgaaaaaggcgccttcaccggcgcggtgcgtcagcgtaaggggcgctttgaactggcg
gacggcggcacgctgtttctggatgaaatcggcgagagcagcgcctcgtttcaggccaag
ctgctgcgtatcctgcaggaaggggagatggagcgggtgggcggcgacgaaaccctgcgc
gtcaatgtgcggattatcgccgccaccaaccgccatctggaggaggaggtgcgcgccggc
catttccgcgaagatctctactaccggctgaacgtgatgccggtgtcgctgccgccgctg
cgggaacggcaggaggatatcgtcgagctggcgcagtttctggtgaagaagatcgccgcg
catcagggccgggcgctgcgcatcagcgacggcgccatccgcctgctgatggggtacaac
tggccgggcaacgtgcgcgagctggaaaattgtctggagcgggcggcggtgatgaccgac
accgggttgatcgaccgcgacgttatcctgtttaaccaccacgacgcggcgccgatgatg
aacaaaccgacgccgccggccgccgccgaagagggctggctcgatcagaatctggatgaa
cgccagcggctgatcgccgcgctggagaaaaccggctgggtccaggccaaggcggcgcgg
ctgttggggatgacgccgcggcaggtggcctatcgcatccagattatggacatcaacatg
caccgtctgtaa
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