Dickeya fangzhongdai DSM 101947: CVE23_20855
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Entry
CVE23_20855 CDS
T05277
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn03420
Nucleotide excision repair
dfn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CVE23_20855
03430 Mismatch repair
CVE23_20855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfn03400
]
CVE23_20855
Enzymes [BR:
dfn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVE23_20855
DNA repair and recombination proteins [BR:
dfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CVE23_20855
MMR (mismatch excision repair)
Other MMR factors
CVE23_20855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
ATZ96209
UniProt:
A0A2K8QRV0
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All DBs
Position
complement(4648893..4651055)
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AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNDKQRDAVAAARSNMLVLAGAGSGKTRVLVHRIAWLLTVENCSPYSIMAV
TFTNKAAAEMRHRIDQLLGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLIKALNLDEKQWPPRQAMWYINGKKDEGLRPQHIDSYGNPVEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRDRFNNILVDEFQDTNRIQYAWIRLLAGDS
AKVMIVGDDDQSIYGWRGAQVENIQHFLRDFSDVATIRLEQNYRSTANILNAANALIAHN
GDRLGKNLWTDGIEGEPISLYCAFNELDEARFVVSRIKVWQEAGGALSECAILYRSNAQS
RVLEEALLQQSLPYRIYGGMRFFERQEIKDALSYLRLMTNRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQATRALLQEKVLAGRAAAALQRFLELVDALASDTADLPLHVQ
TDRVIRDSGLWSMYEQEKGEKGQARVENLEELVTATRQFSYQDEDQDLLPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFVVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAESRRLYGKETYHRPSRFIGELPPECVEEVRLRASVSRPVNHQRLG
TPISQSDSGYKLGQRVRHAKFGEGTIVNVEGSGDHCRIQVAFAGQGIKWLVAAYARLDTV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatctgacctgctcgacagtctgaatgataaacagcgtgacgccgtggcggcg
gcgcgcagcaacatgctggtactggctggcgcaggcagtggcaaaacccgcgtgctggtt
catcgcatcgcctggttgctgacggtggaaaactgttcgccttattcgatcatggcggtg
accttcaccaacaaggcggcggcggaaatgcgccaccgtatcgatcaactgctcggcacc
agtcagggcgggatgtggatcggcacgttccacggactggcgcatcgactgctgcgcgcg
caccatctggatgccggcttgccgcaggatttccagattctggacagcgaagatcagttg
cggctgctcaaacgtctgatcaaggcgctgaatctggatgagaagcagtggccgccccgt
caggcgatgtggtacatcaacggcaagaaagacgaagggctgcggccgcagcacatcgac
agctacggcaatccggtggagcagacctggctgcgcatctatcaggcttatcaggaagcg
tgcgatcgcgccgggctggtggatttcgccgaattgctgctgcgcgcccacgaattgtgg
ctcaacaaaccgcatatcctgcagcattaccgcgaccgttttaacaacattctggtggac
gagtttcaggataccaaccgtatccagtacgcctggattcgcctgctggccggcgacagc
gccaaagtgatgatcgtcggcgacgatgaccagtcgatctacggctggcgcggggcgcag
gtggagaacatccagcacttcctgcgcgatttcagcgacgtagccaccatccgtctggag
cagaattaccgttccaccgccaacatcctcaatgccgccaacgcgctgattgcccacaac
ggcgaccggctgggcaagaacctgtggaccgatggcatcgagggcgaaccgatttcgctg
tattgcgcctttaacgaactggacgaagcgcggtttgtggtcagccgcatcaaggtgtgg
caggaagcgggcggcgcgctcagcgaatgcgccattctttatcgcagcaacgcccagtcg
cgcgtactggaagaagcgttgttgcagcaaagcctgccgtaccggatttatggcggcatg
cgcttcttcgaacgacaggaaatcaaggatgcgctgtcttatctgcggttgatgaccaac
cgcaacgatgacgccgcctttgagcgtgtggtcaatacgccgacgcgcggcatcggcgat
cgcacgctggacgtggtgcgccagacggcgcgcgaccgccagttgacgctgtggcaggcc
acgcgcgcgttgttgcaggaaaaagtgctggccgggcgcgccgccgccgcgctgcaacgt
tttctggaactggtggatgcgctcgccagcgataccgccgatttaccgctgcatgtgcag
actgaccgggtgatccgcgattccgggttgtggagcatgtacgagcaggaaaaaggcgag
aagggtcaggcgcgggtggaaaacctggaagaactggtgacggcgacccgccagttcagc
tatcaggacgaagatcaggacttgctgccgctgcaggcgtttttgtctcatgccgcgctg
gaagccggcgaagggcaggcggacgcctatcaggacgcggtgcaattgatgacgctacac
tccgccaaagggctggagttcccgcaggtattcgtcgtcggcatggaagaggggatgttc
cccagccagatgtcgctggatgaaggcggccgtctggaagaagaacgccggctggcctac
gttggcgtgacgcgcgccatgcagaaactgacgctgacctacgccgaaagccgccgtctg
tacggcaaggaaacctatcaccgtccgtcgcgttttatcggcgaactgccgccggagtgc
gtggaagaggtacggctgcgcgccagcgtctcgcgcccggtcaatcatcagcggctgggg
acgccaataagccagagcgatagcggttataagctggggcaacgggtgcgccacgccaaa
ttcggcgaaggcaccattgttaatgtggaaggcagcggcgatcactgccggatccaggtg
gcgtttgccggtcagggcatcaaatggctggtggccgcgtatgcccgtttggatacggta
taa
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