Dickeya fangzhongdai DSM 101947: CVE23_21200
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Entry
CVE23_21200 CDS
T05277
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfn03016
]
CVE23_21200 (trmA)
Enzymes [BR:
dfn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
CVE23_21200 (trmA)
Transfer RNA biogenesis [BR:
dfn03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
CVE23_21200 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
Cons_hypoth95
MTS
Methyltransf_11
Methyltransf_31
Methyltransf_15
PrmA
Methyltransf_12
TRM5-TYW2_MTfase
DREV
Motif
Other DBs
NCBI-ProteinID:
ATZ96263
UniProt:
A0A2K8QRZ0
LinkDB
All DBs
Position
4723420..4724523
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AA seq
367 aa
AA seq
DB search
MTPEILPIDQYDAQLEEKTGRLGAMMAPFDAPAPAVFRSPVSHYRMRAEFRIWHDGDDLY
HIMFDQQTKQRIRVDQFPAASELINRLMPALLSALRAEPVLRRKLFQIDYLSTLSGEIAV
SLLYHKALDDEWQQHARLLRDQLRSQGFALQLIGRATKTKICLDRDYVDECLPVAGRQMI
YRQVENSFTQPNAMMNIQMLEWALSVTQGSKGDLLELYCGNGNFSLALARNFERVLATEI
AKPSVAAAQYNIAANQIDNVQIIRMAAEEFTQAMNGVRQFNRLQGIDLSGYRCETIFVDP
PRSGLDDGTVKLVQAYPRILYISCNPETLCANLETLSQTHRISQLALFDQFPYTHHMECG
VLLEKRQ
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgacgccagagattctgcccatcgaccagtatgacgcccagcttgaagaaaaaaccggg
cgcctcggagccatgatggcgccattcgatgcgccggcgccggccgtgttccgatcgccg
gtcagtcactaccggatgcgggcggaatttcggatctggcatgatggcgatgacttgtac
cacattatgtttgatcagcagaccaaacagcggatccgcgtcgatcagtttccggccgcc
agcgagttgatcaaccgcctgatgccggcgctgctcagtgccctgcgggccgagccggtg
ctgcggcgcaagctgtttcagattgattatctctccacgcttagcggtgagattgcagtt
tcgttgctctaccacaaagcgctggatgacgaatggcagcagcacgcccgcctcctgcgt
gatcaactgcgcagtcagggttttgccctgcaactgattggccgcgccaccaaaaccaaa
atctgtctggatcgggattacgtggacgaatgcctgccggtcgccggccgtcagatgatt
tatcgtcaggtggaaaacagcttcacccaacccaatgcgatgatgaatatccagatgctg
gagtgggcgctatcggtgacgcaggggtcgaaaggcgatctgctggaactgtactgcggc
aacggtaacttttcgctggcgctggcgcgcaatttcgagcgggtgctggcaaccgaaatc
gccaagccatcggtcgcggcggcgcagtacaatattgccgccaaccagattgataacgta
cagattattcgcatggcggcggaggaattcacccaggccatgaacggcgtgcgtcagttc
aaccgcctgcaaggcatcgatctgagcggctatcgctgtgaaaccatttttgtcgatccg
ccccgcagcggcctggacgacggcaccgtaaaactggtgcaggcgtacccgcgcattctg
tacatctcctgcaacccggaaacgctgtgcgccaacctggaaaccctaagtcagacgcac
cgaatcagccagttggcgctgtttgaccagttcccttatacccaccacatggaatgcggc
gtgttactggaaaagcgccaataa
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