Dickeya fangzhongdai DSM 101947: CVE23_21255
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Entry
CVE23_21255 CDS
T05277
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CVE23_21255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfn03400
]
CVE23_21255
Enzymes [BR:
dfn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVE23_21255
DNA repair and recombination proteins [BR:
dfn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CVE23_21255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHD_PriA
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
TrwB_AAD_bind
Zn_ribbon_6
Zn_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
ATZ96774
UniProt:
A0A2K8QTH3
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All DBs
Position
4735171..4737369
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AA seq
732 aa
AA seq
DB search
MPVVQVALPVPLTRTFDYRLPPGMTPPVPGVRVSVPFGNRKMIGIVTALSAGSELPLEQL
KPLHDVLDDAPLFPDSLWRILLWAAEYYHYPLGEVLFHALPILLRQGKPAHSAPLWQWFA
TEQGRATPLNALKRAPKQQQALAALLQGPLYRHQMAETELTEAALQALREKGLSELRALP
QQVRDWRNDFSLTGERLRLNTEQATAVGAIRSEDDHFAAWLLAGITGSGKTEVYLSVLEN
ILAQGKQALVLVPEIGLTPQTIARFRDRFNAPVEALHSGLNDGERLSVWLRARQGEAAIV
IGTRSALFTPFARLGLIVIDEEHDGSYKQQEGWRYHARDLAVFRARQEDIPIVMGSATPA
LETLYNVQIGKYRQLRLSKRAGNARLAQQHLLDLKGLPLTTGLSQPLINRIRHHLAADNQ
VILFLNRRGFAPVVLCHECGWIAECQRCDSYYTLHQHQRMMRCHHCDSQRPIPQQCPQCG
STHLVPVGLGTEQLEQALPTLFPEAPITRIDRDTTSRKGALEQQLAQVRQGGARILIGTQ
MLAKGHHFPDVTLVALLDVDSSLFSADFRATERFAQLYTQVSGRAGRAGKAGEVVLQTHH
PEHPLLQTLLHQGYDAFASQTLKERQSVFLPPFTSHVLFRADDHDNQQASLFLQQLRNLL
EASPLRDDSLWLMGPVPALQPKRAGRFRWQLLLQHPSRATLQRLIRNSMPLIDTLPQTRK
VKWVMDVDPTDN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgttcaggttgccttgccggtaccgctgacgcgcacgtttgattaccggctg
ccgccaggcatgacgccgccggtgccgggcgtgcgcgtcagcgttcccttcggcaaccgt
aagatgatcggtatcgtcactgccctgagcgccggtagcgaactgccgctggaacagctt
aaaccgctgcacgacgtgctcgacgacgccccgctgtttccggacagtctgtggcgcatc
ctgctgtgggcggcggagtattaccactatccgcttggcgaggtgctgttccatgccctg
ccaatattgctccgccaggggaaaccggcccatagcgcgccgctctggcaatggttcgct
accgagcaggggcgcgccacgccgctgaacgcactgaaacgggcgcccaagcaacagcag
gcgctggcggcgctgctacaagggccgctgtaccgccatcagatggcggaaaccgagctg
acggaagccgcgctgcaggcgctgcgtgaaaaagggctgagcgaactgcgcgcgctgccg
cagcaggtgcgggactggcgcaacgatttcagcctgacgggcgagcgcctgcgtcttaat
accgaacaggctaccgccgtcggcgccatacgcagcgaagacgatcattttgccgcctgg
ctgctggcgggcattaccggctccggcaaaaccgaggtctacctcagcgtgctggaaaat
attctggcgcaaggcaagcaggcgctggtgctggtgccggaaatcggcctgacgccgcaa
accatcgcccgcttccgcgatcggttcaacgcgccggtggaagcgctgcattcagggctg
aacgacggcgagcggctgtcggtgtggctgcgcgccagacaaggcgaagcagccatcgtc
atcggcacccgttccgcgctgtttaccccttttgcccgactggggctgatcgtcatcgac
gaagaacacgacggctcctacaagcagcaggaaggctggcgttatcacgcccgcgatctg
gcggtgttccgcgcccggcaggaagacattcccatcgtcatggggtcggccacgccggcg
ctggaaacgctttataacgtgcagattggcaaataccgccagttgcgtcttagcaagcgc
gccggcaatgcccgactggcgcagcaacatttgctggacctgaaagggctgccgctgacc
accggtttgtcgcagccgttaatcaaccgcatccgccatcacctggccgcggacaatcag
gtcatcctgtttctcaaccgccggggtttcgcgccggtggtgctgtgccatgaatgcggc
tggatcgccgaatgccagcgctgcgacagctactacaccctgcaccagcatcaacggatg
atgcgttgccaccactgcgacagccagcgtccgataccgcagcaatgcccgcagtgcggc
tctacccatctggtgccggtcggtctgggcaccgaacagctggaacaagcgttgccgacg
ctgtttcccgaggctccgatcacccgtatcgatcgcgataccaccagccgcaaaggggcg
ctggagcagcaactggcgcaggttcgccagggcggcgcccgcattctgatcggcacccag
atgctcgccaaaggccaccactttcccgacgtcacgctcgtggcgttgctggatgtcgac
agctcgctgttttccgccgacttccgcgccaccgaacgcttcgcccagctctacacccag
gtgtccggtcgcgccggtcgcgccggcaaggcgggcgaagtggtgctgcaaacccatcac
ccggagcatccgctgttgcagacgctgctgcatcagggctacgacgctttcgccagccag
acgctgaaagaacgccagagcgtgttcctgccgccgtttaccagccatgtgctgttccgg
gccgatgaccacgacaatcagcaggccagcctgttcctgcaacagttacgcaatctgctg
gaagccagtccgctgcgcgacgactcgctgtggttgatgggaccggtgccggcgctgcag
cccaagcgtgccgggcgttttcgctggcaattgctgctgcagcatccgtcgcgcgccacg
ctgcaacgactgatccgcaattccatgccgttgatcgataccctgccgcaaacgcgcaaa
gtgaaatgggtgatggatgtcgacccgacggacaattga
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