Dickeya fangzhongdai DSM 101947: CVE23_21565
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Entry
CVE23_21565 CDS
T05277
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
dfn
Dickeya fangzhongdai DSM 101947
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfn03021
]
CVE23_21565 (rpoH)
Transcription machinery [BR:
dfn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CVE23_21565 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ATZ96329
UniProt:
A0A2K8QS76
LinkDB
All DBs
Position
complement(4804079..4804936)
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AA seq
285 aa
AA seq
DB search
MTKDMQTFALVPQGSLEGYIRAANAYPMLTAEEERALAERLHYHGDLDAAKQLILSHLRF
VIHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPDVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVELVARELGVTSKDVREMESRMAAQDM
TFDPSPEDDAQPGQPMAPMLYLQDKSSDFADGIEEDNWETHAADKLSYALEGLDERSQHI
IRARWLDDDNKSTLQELADHYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagatatgcaaactttcgccttagttccccagggcagtctggaagggtacatc
cgtgccgccaatgcctatccgatgctgacggcggaggaagagcgggcgctggctgaacgg
ctgcattatcacggggatctggacgccgccaagcagctgattctttcacacctgcgtttc
gttattcatgttgcccgtaactattcagggtacggcctgccgcaggcggatctgattcag
gaaggcaacatcggcttgatgaaagcggtgcgccgcttcaacccggatgtgggcgtacgc
ctggtgtcgttcgccgtgcactggatcaaggccgaaattcacgaatacgtgctgcgtaac
tggcgtatcgtcaaggtggcgaccaccaaggcgcagcgcaagctgttcttcaacctgcgt
aagaccaagcagcgtctgggctggtttaatcaggacgaagtggaactggtggcgcgtgaa
ctgggtgtgaccagcaaggatgtccgcgaaatggaatcccgcatggccgcgcaggacatg
acgtttgatccgtcgccggaagatgatgcgcagccgggccagccgatggcgccgatgctg
tacctgcaggacaaatcttccgactttgccgatggcattgaagaggacaactgggaaacc
catgcggcggacaagttgtcctatgcgctggaagggttggacgaacgcagccagcatatt
atccgcgctcgctggctggatgacgacaataagtccacgttgcaggaactggctgatcat
tacggcgtgtccgctgagcgtgtacgtcagctggaaaagaatgccatgaagaaattgcgg
gcggccattgaagcgtaa
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