Dickeya fangzhongdai DSM 101947: CVE23_22315
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Entry
CVE23_22315 CDS
T05277
Name
(GenBank) pectate lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00040
Pentose and glucuronate interconversions
dfn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CVE23_22315
Enzymes [BR:
dfn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
CVE23_22315
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Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
DUF4982
Motif
Other DBs
NCBI-ProteinID:
ATZ96465
UniProt:
A0A2K8QTN8
LinkDB
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Position
complement(4978162..4980366)
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AA seq
734 aa
AA seq
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MKYAASGLLSVALNSFLLLGSNTAVAATQDTAPVWHSIAFGQSTDVNFATNVLPDKVGVN
DVTINGKKLTVNDKVDLSAPITIESRGGKIANTHDGLTFFYTQLPANVNFTLQSDVTVDQ
FGPESDAKPNAQEGAGLLVRDILGVPRQEPLKEGYEEFPAASNMVMNAIMTQDKKSKTEV
KMQLISRDGVTQPWGNTNAQITRASYQEKINLEQTPTFRLKLERTDDGFITSYAPKGSDQ
WVSKTVKGADLVTHQDKNHYYVGFFASRNAKITISNASLTTSPANTKPSAPFKAEVNAPL
LQVASSPLSASETYPVQARVNYNGTIEVFQNGKSLGKPQKIRAGDYFSLTAKLTQPKSDF
KLVYLPGEGEDKTAKETSFSVEKIKLADAKNLYVSPEGKADNNGSKNAPLDIKTAINALQ
AGGTLWLMDGDYSATVIPVSASGNANGIKTLMPAGKKAVFHGLQLNASYWKVKGVEITEK
SFRIEGSYNQIERVLAHHCDNTGIQVSSSDSVGRPLWASHNLILNSESHSNQDPSKKDAD
GFAVKMRVGEGNVIRGAFSHDNVDDGFDLFNKIEDGPNGVVVIENSISVNNTSNGFKLGG
EGQPVAHQVKNSIAIGNHMDGFSDNFNPGALQVTNNIALDNVRFNFIFRPSPYYGPEKQG
IFKNNVSLRTQPGKYDDAVVGRVDASNYFIKNNRALNSQGKEITTANYKSVAVPAVFSRD
EKGNLQLGDFLKKK
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacgctgcttcggggcttctctctgtcgccctaaattcttttttgcttctgggt
tccaataccgccgttgccgccactcaggataccgcgccagtctggcatagcatcgcgttc
ggccagtccacggatgtgaatttcgcgaccaacgtcctgccggacaaggtgggcgtcaac
gacgtcaccatcaacggcaaaaagctgacagtaaatgacaaggtcgacctgtccgcgccg
atcactatcgaaagccggggaggaaaaatcgccaatacgcatgacggcttgaccttcttc
tacacgcagttgcccgccaacgtgaatttcacgctgcaatccgatgtgacggtcgatcag
ttcggcccggaaagcgacgccaaacccaacgctcaggaaggcgccggcctgctggtgcgc
gatattctcggcgtaccgcgtcaggagccgttgaaagagggatacgaagagtttccggcg
gcatcgaacatggtgatgaacgccatcatgacgcaggataaaaaatcgaaaaccgaagtg
aagatgcagctcatcagccgcgatggcgttacgcagccctggggtaataccaacgcacaa
atcacccgcgccagctatcaggaaaaaatcaatctggaacaaacgccaacgttccgcctg
aaactggaacgcacggatgacggcttcatcacctcttatgcgcccaagggcagcgaccag
tgggtcagcaagacggtaaaaggcgcggatttagtcactcatcaggacaagaatcactac
tatgtggggttcttcgcctcccgtaacgcgaagatcaccatcagcaatgccagtctgacc
accagcccggccaacaccaaaccttccgccccattcaaagcagaagtcaatgcgccgttg
ttgcaggttgcatcttccccgctctccgccagcgagacctacccggtacaggcgcgggtc
aattacaacggcactattgaagtgttccagaacggcaaatcgctcggcaaaccgcaaaaa
attcgcgccggcgattatttctctcttaccgcgaagctgacgcagcctaaatccgatttc
aaactggtttacctgccgggtgaaggcgaagacaaaacggcgaaagaaacctcgttcagc
gtggaaaaaatcaagctggccgatgccaaaaatctgtatgtttctccggaaggcaaagcc
gacaacaacggcagcaagaacgcgccgctggatatcaaaacggccattaacgccctgcag
gccggcggcacgctgtggttgatggacggcgattacagcgccaccgtgattccggtcagc
gccagcggcaacgccaacggaattaaaacgttgatgccggccggcaaaaaagcggtattc
cacgggctacagctcaacgccagctactggaaagtcaaaggcgttgaaatcacggaaaaa
agcttccgtattgagggcagctacaaccagattgaacgcgtgctggcgcaccactgcgac
aacaccggtattcaggtttcctccagcgacagcgtgggtcgtccgctgtgggccagccat
aacctgattctgaactcggaatcgcacagcaatcaggatcccagcaaaaaagatgcggac
ggcttcgccgtgaaaatgcgcgtcggcgagggtaacgtgattcgcggcgcattctcccat
gacaatgttgatgacggcttcgacctgttcaacaaaattgaagacggcccgaacggggtt
gtggtgatcgagaattccatttcggtcaacaacaccagcaacggctttaaactggggggc
gaaggccagccagtggctcatcaggtgaaaaatagcatcgctatcggcaaccacatggac
gggttcagcgacaacttcaacccaggcgcgctgcaagtcaccaacaacatcgcgctggat
aacgttcgcttcaactttatcttccgcccaagcccttactatggcccggaaaaacaaggg
attttcaaaaacaacgtttcgctgcgtactcaacccggtaagtatgacgatgcggtggtg
ggccgagtggatgccagcaactatttcatcaagaataaccgtgcgctcaacagtcagggc
aaggagatcaccacggcgaattacaaatccgtcgcggtgccggcggtcttcagtcgcgat
gaaaaaggcaatctgcaattgggtgattttctgaagaagaaataa
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