Dehalogenimonas formicexedens: Dform_00071
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Entry
Dform_00071 CDS
T04654
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
dfo
Dehalogenimonas formicexedens
Pathway
dfo03030
DNA replication
dfo03430
Mismatch repair
dfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dform_00071 (holA)
03430 Mismatch repair
Dform_00071 (holA)
03440 Homologous recombination
Dform_00071 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfo03032
]
Dform_00071 (holA)
03400 DNA repair and recombination proteins [BR:
dfo03400
]
Dform_00071 (holA)
Enzymes [BR:
dfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dform_00071 (holA)
DNA replication proteins [BR:
dfo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dform_00071 (holA)
DNA repair and recombination proteins [BR:
dfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dform_00071 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
HP_1247_M
CGGBP1_C
Motif
Other DBs
NCBI-ProteinID:
APV43436
UniProt:
A0A1P8F4N6
LinkDB
All DBs
Position
complement(67401..68405)
Genome browser
AA seq
334 aa
AA seq
DB search
MRYLLAGPDDFSLKLKLASIKASLGDASVLATATSIFEGARLKPGEFKLTVDALPFLTPC
RLVIVTGLLARFSTGDGTLKKASKIDDPEVFASAITNSPPSTAIILIETELSRNNPLFKY
LVDKVELHEFPTLDKPKLKEWIGRRVMNAGGAITPMAINLLVQYVGADLWAVAGEIEKLV
LFAAGRQITDHDVKTLVGYTGEANIFSLVDAIFETRLKTATETLENLKINGLSAGYVLAM
LSRQLRLVIQYKDLKSRGGKELEIRRKLGLIADFLWKKTQDQAARFSLGRLKDVYRRLLD
TDLAAKTGRMDEDLALDLLVAELASGAPLEPLSA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
ttgcggtatctccttgccggcccagacgatttttctctaaagctcaagctcgcctcgatc
aaggcgtcgctcggcgacgcgtccgtcctggctaccgccaccagtattttcgagggggcc
aggcttaaacctggagaattcaagctcaccgtcgatgccctgcctttcctcaccccgtgc
cggcttgtcatagttaccggcttgttggcccgtttctccacgggcgacgggaccctgaaa
aaagcctcgaagatcgacgatccggaagttttcgccagcgccataaccaattcgccgccg
tccaccgccatcatcctgattgaaaccgagctttcgcgcaataacccgctgttcaagtat
ctcgtagataaagtcgagcttcacgaattcccgacgctcgacaaaccaaaacttaaagaa
tggatcgggcgccgggtgatgaacgccgggggtgccatcaccccgatggcgataaacctc
ctggttcaatacgtcggcgccgacttatgggccgtcgccggcgagatcgaaaagctggtg
ttgttcgccgccggccgccagattaccgaccatgacgttaaaacactggtcggctacacc
ggtgaagcgaatatcttcagcctggtggacgctattttcgaaacccggttgaaaaccgct
acggagaccctcgaaaatctcaagatcaatggactttcggctggctacgtcctggcaatg
ctgtcccgtcaattgcgactggtcatccagtacaaggatttgaagagtcgcggcggcaag
gagctcgaaattcgaaggaagcttggactcatagctgattttctgtggaaaaaaacccag
gaccaggcggcgcgtttctccctgggccgtttgaaggatgtctatcggcgtttgcttgat
accgacctggcagccaaaaccggacggatggatgaggacctcgccctggatctgttggtt
gctgaactcgccagcggcgccccgctcgagcctttgtccgcgtaa
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