KEGG   Dehalogenimonas formicexedens: Dform_00110
Entry
Dform_00110       CDS       T04654                                 
Name
(GenBank) DNA repair protein RadA/Sms
  KO
K04485  DNA repair protein RadA/Sms
Organism
dfo  Dehalogenimonas formicexedens
Brite
KEGG Orthology (KO) [BR:dfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dfo03400]
    Dform_00110
DNA repair and recombination proteins [BR:dfo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Dform_00110
SSDB
Motif
Pfam: AAA_25 ATPase Zn_ribbon_LapB ChlI DnaB_C Lon_C AAA AAA_22 AAA_16 AAA_14 NACHT AAA_19 Isochorismatase NTPase_1 KdpD nSTAND3 AAA_5 SLFN-g3_helicase DAP3 zf-RING_10
Other DBs
NCBI-ProteinID: APV43473
UniProt: A0A1P8F4T6
LinkDB
Position
complement(103165..104565)
AA seq 466 aa
MPKSRVIFVCSGCGQESAKWQGKCPGCGDWNTLFEQTVAAVKSSSSRKIANNAPQPLPDI
EITGNERIALTMGEVNRVLGGGLVPGSLSLVGGEPGIGKSTLLLQVAAQMAELAKSPVLY
VSGEETRPQIKMRARRLGIEGDGLYLLNETDLDNIIAEMDKLSPSLVIIDSIQTVYAPDI
EMAPGGVSQVRECAARLVTWAKSSQTPVLIAGHVTKDGAIAGPRLLEHIVDTVLYLEGEP
FSSYRILRSIKNRYGSVNEVGIFEMKEDGLRQVENPSEVFLSRDRQNTVGSAVVPVLEGS
RPLLVEIQALTNMTSFGQPRRTANGLDFGRLIIITAVLSRRAYLKLGTQDVIASATGGLH
LDEPAADLATALAIASSYKNAPVDASLVAIGELGLSGEIRNVPQIERRLAEADRLGFKKA
IIPANVRVKSPSPDFKLIPVRDIRQALRESLTPGIDGEAPASEETI
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgccaaagtcacgcgtcatcttcgtctgttccggctgcggccaggagtccgccaagtgg
cagggtaaatgccccggctgcggcgattggaacacccttttcgaacagaccgtggctgcc
gttaaatcgtcatcgtcacgaaagatcgctaacaacgccccccaacccctgcccgacatc
gaaatcaccggtaacgaacgtatcgccctcacgatgggtgaagtcaaccgcgttctcggt
ggcgggctggtgccggggtccttgtcgctggtcggcggcgaaccgggcatcggcaaatcc
accctgctcctccaggtcgccgcccagatggcggaactcgcgaagtcgccggtgctatac
gtctccggtgaagaaacccgccctcagatcaagatgcgcgccaggaggcttggcatcgaa
ggcgacggcctctacctgctgaatgagaccgacctcgataacattattgccgagatggat
aagctttctccttcgcttgtcatcattgattcgattcagactgtttacgcccctgacatc
gagatggctcccggcggcgtctcccaggtccgtgaatgcgctgctcgcctggtcacctgg
gcaaaatcgtcgcagactccggtgctcatcgccggacacgttaccaaggacggggccatc
gccggaccgaggctcctcgagcatattgtcgacaccgtgctgtaccttgagggagagccg
ttctccagctaccgcattctccgctcgatcaagaaccgttacggctcggtcaacgaggtc
ggtatcttcgagatgaaggaagacggcctgaggcaggtcgagaacccctcggaagtcttc
ctgtcccgcgaccgtcagaataccgtcgggtcggctgtggtgcctgttctcgagggctca
aggcctttactcgttgaaatccaggcgctgaccaacatgaccagcttcggccagccccgc
cgcaccgccaacggtctcgatttcggacgattgatcatcatcaccgccgtactttcccgc
cgggcttatttgaaactcggcacccaggacgtcatcgcctcggcgaccggcgggctgcac
ctggacgagcccgccgccgatctggcgacagccctcgccatcgcctccagctacaaaaat
gcgcctgtcgacgcttcgctcgtcgccatcggagaactcggtttgtccggcgagataagg
aacgtgccccagattgagcgccggctggctgaggcagatcgcctcggtttcaagaaggct
atcattccggctaacgtccgggtcaaatccccctcccctgatttcaaattgattccggtc
cgcgacatccgccaggccctcagggagagcctgacaccgggaatcgatggagaagccccg
gcttcggaagaaaccatctag

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