Dehalogenimonas formicexedens: Dform_00222
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Entry
Dform_00222 CDS
T04654
Symbol
truA
Name
(GenBank) tRNA pseudouridine38-40 synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dfo
Dehalogenimonas formicexedens
Brite
KEGG Orthology (KO) [BR:
dfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfo03016
]
Dform_00222 (truA)
Enzymes [BR:
dfo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Dform_00222 (truA)
Transfer RNA biogenesis [BR:
dfo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dform_00222 (truA)
Prokaryotic type
Dform_00222 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
STAT1_TAZ2bind
Motif
Other DBs
NCBI-ProteinID:
APV43585
UniProt:
A0A1P8F566
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All DBs
Position
195294..196064
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AA seq
256 aa
AA seq
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MATKVALIIEYDGTRLLGSQYQSRGATVQSELEAAIERLTGEKLRVLLSSRTDTGVSAQG
QVACFRGAANLSPERVMGGLNRFLPDDIAVKAAYRIPDSLDVRREAVSREYVYRIWNSPV
PSPLSERFRFRVGPHLDEKAMDAAARMLAGTHDLAAFGSAGSTGKSTVRSVYEAGVSREG
MEVTFRMVASSFLTHQIRNTVGALIKVGQGRMSPEEFGALLEVKKPGSAGPAAPGKGLCL
VKINYLRDLGDYNENI
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaccaaagtagctttaataattgaatatgacggcaccaggctgctgggctcccag
taccagagccggggggctacggtccaatcggaactggaagcggctatagagcggctgact
ggggaaaagctccgggtgcttctatccagccgtaccgataccggggtctcggcccagggt
caggtggcttgtttccgcggcgcggcgaacttgtcgccggagcgggtgatgggcggcttg
aatcgctttcttcccgatgacatcgcggtgaaggcggcctaccggataccggactcgctg
gatgtccgccgggaagcggtcagccgggagtatgtctaccgcatctggaacagcccggtg
ccctcgcccctatccgagcggttccgattcagggtcggaccgcacctagatgagaaggcg
atggacgcggcggcgaggatgctcgccgggacccacgacctggcggctttcggcagcgct
ggctcaaccggcaagagcacggtacgctccgtttatgaggcgggcgtcagccgggagggg
atggaagtgaccttccggatggtggccagttcgttcctgacccaccagatcaggaacaca
gtgggcgccctgataaaagtggggcagggcaggatgagtcccgaagagttcggggcatta
ctggaagttaaaaaaccgggatcggccggtccggcagcgccgggcaaggggctgtgcctg
gtgaagataaactacctgagagacttgggagattacaatgaaaacatttag
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