Dehalogenimonas formicexedens: Dform_00307
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Entry
Dform_00307 CDS
T04654
Name
(GenBank) RNA polymerase primary sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
dfo
Dehalogenimonas formicexedens
Brite
KEGG Orthology (KO) [BR:
dfo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Dform_00307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfo03021
]
Dform_00307
Transcription machinery [BR:
dfo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dform_00307
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Motif
Other DBs
NCBI-ProteinID:
APV43667
UniProt:
A0A1P8F5A8
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All DBs
Position
complement(262534..263886)
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AA seq
450 aa
AA seq
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MASLIPPDEIVNQLIQLHQEQGYVSEDAVLAAIRKHSLPLDGVERLCDHLLSIGVVIRDD
LNDLLAVSDDGYDRSKINYRELFEEVMEIDPSLSYFIEELRLIKPPQHREWQLLIPQALN
NNPFARRRIVEMYLKTVVRAALWHHKQYSLPLADMIQEGAIGLITALDKYEPGVHDKFSI
YAPWWVRQNIMRAAPGPNPLVYYPVHIKDKLYRIHEVVTQHYCDQCINSIVCPNLIESIV
MKLECKTEEAEDLIQLFGTYVSLDSCDQTSPSFADDGGQIEELVEEAFQQSLQSTINEVL
GTLKPREKEVIMLRFGLGNKREHTLEQIGIIFDLTRERIRQIEAKALRRLRHPSRSRKLA
NYLPMKKGDDKEGAPSESKSIKPASFDIIEYLEDNAIPFVDLREKAGALWIIGGEELRLH
VAELKEYGIKLKFVAGGGKATNHQPSWYVK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtggctagtttaattccccctgacgagattgttaatcagctaattcaactacatcaagaa
caaggctatgtttctgaggacgcggttctagctgcgattcgcaagcattcgcttccgctt
gatggagtggaacgcctttgtgatcatcttctttcaattggagtagttattcgtgatgat
ttaaatgatcttcttgcggtatctgatgacgggtatgaccgaagtaaaatcaactataga
gaactattcgaagaggtcatggaaatcgacccaagcctatcatactttatcgaagagctt
cgcctcattaagccgccccaacatagggaatggcaattattgatcccacaggcgttaaat
aacaatccttttgccaggcgtagaatcgtagagatgtatttgaaaacagttgtccgggcc
gccttgtggcatcacaaacaatactcactacctcttgctgacatgattcaagaaggtgct
attggcctcatcacggcactggacaagtacgaacctggagttcatgataaattctccatc
tatgctccatggtgggttagacaaaatattatgcgtgcggcgcccggacccaacccactt
gtatattaccctgtacatataaaggataaactttataggattcatgaagttgttacacag
cattattgtgatcaatgtatcaatagcattgtctgccctaaccttatagagtcaattgtt
atgaaattggaatgtaaaacagaagaggctgaagacctaattcagcttttcggcacttat
gtttcattagattcgtgcgatcaaacgagtccctcgtttgctgacgatggggggcaaatt
gaagagttggttgaagaagcttttcagcaatcgctgcagtccaccataaatgaggtgtta
ggtacgcttaaacctcgcgagaaagaagtaataatgctgcgatttgggttgggtaataaa
agggaacacaccttggagcagataggtatcatttttgacttgacacgggaacgaataagg
caaatagaagctaaagctcttcgcaggcttcgtcatccctccaggagccgtaaactcgct
aactaccttccgatgaagaaaggagatgataaagaaggagcacctagtgaatccaaaagt
atcaaaccagcatcttttgacatcatcgaatacctcgaggataacgcaattccatttgtt
gatcttcgcgaaaaagccggagcactttggattattggcggagaagaactacgcttacat
gtagcagaactgaaagagtatggcattaaattaaaatttgttgctggaggcggcaaggct
acaaatcatcagccaagctggtatgttaaatga
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