Dehalogenimonas formicexedens: Dform_00683
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Entry
Dform_00683 CDS
T04654
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dfo
Dehalogenimonas formicexedens
Pathway
dfo00300
Lysine biosynthesis
dfo00470
D-Amino acid metabolism
dfo01100
Metabolic pathways
dfo01110
Biosynthesis of secondary metabolites
dfo01120
Microbial metabolism in diverse environments
dfo01230
Biosynthesis of amino acids
Module
dfo_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dfo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Dform_00683 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Dform_00683 (lysA)
Enzymes [BR:
dfo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Dform_00683 (lysA)
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Ortholog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
APV44038
UniProt:
A0A1P8F6G6
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All DBs
Position
638474..639817
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AA seq
447 aa
AA seq
DB search
MTASCGIAIMGGMKNAPLFFPLGSTIDDNGHLRIGGLDAVELAKEYGTPLYVFDENDIRE
RCREFKREFAGRYPATHIAFAGKACLNKAIAKVVASEGFGLDVVSGGELEIARSAGFPTN
QIYFHGNNKSDAELEMALEYKVGRIVVDNFYELSRLDAMAARRGVKADIMFRIKPGIDPH
THAKITTGNIDSKFGFGLDDAADAVARAMKCGNLKLTGFHYHIGSQIFEIQPFLDALKTT
LEFMARMKRELGFITEELDAGGGYAVQYLSGAQPPAIGEYAEAIVSLLRSECHRLGLALP
KLSVEPGRATVARSAVALYTVGAIKDIPGVRCYACVDGGMADNIRPALYCSQYEPYLANR
MADYADQTYTIAGRFCESGDILANDVKLPEVKPGDILVMPVSGAYSIPMSSNYNAFCRPA
VVMVKDGQARIIKRRETVEDLLRTDLG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgcgtcatgcggtattgctatcatgggcggtatgaaaaacgctcctcttttcttc
cctttgggttcgaccatcgatgacaacgggcatctccggataggcggtctcgatgccgtc
gaattggccaaagaatacggcactccgttatacgtgttcgatgagaatgacatccgggag
cgatgccgtgaattcaagcgggagttcgccggccgttacccggccacccatatcgccttt
gccggtaaagcatgcctcaacaaagccatagctaaagtagtcgcctcggagggcttcgga
ctggatgtcgtctccggcggcgagctcgagatcgcccgctccgcgggattccccaccaac
cagatttacttccacggcaacaacaagtcagacgccgaactcgaaatggcgcttgagtac
aaagtcgggcgcatcgttgtcgataatttttacgaactcagccgcctcgacgcgatggcc
gcgaggcgcggggtaaaagccgacatcatgttccgcatcaagccggggatcgatccccat
acccacgccaagatcacgaccggcaatattgactccaagttcggtttcggcctcgatgac
gccgccgatgccgtggcgcgggcgatgaagtgcggaaatttgaaactgaccggcttccac
tatcacatcggttcccagatcttcgagatccagccgttcctcgacgccttgaaaacgacc
cttgagttcatggcccggatgaaacgagaactcggttttattaccgaggaactggatgcc
ggcggcggatatgccgtccaatacctgtccggcgcccaaccgccagccatcggcgaatat
gccgaggcgatcgtaagcctgttgaggtccgaatgccatcgcctggggctggcgctgccc
aaactgtccgtcgaaccggggagggcaacggtggcaaggtcggccgttgccctgtatacc
gtcggcgccatcaaggatatccccggcgtccgatgctacgcctgcgtcgacggcggcatg
gccgacaacatccggccggcgctgtattgctcacagtacgagccttacctggccaaccgg
atggcggattacgccgatcagacgtataccatcgccgggcgtttctgcgaatccggcgac
atcctggcaaacgatgtcaagttgcccgaggtgaaacccggcgacatcctggtgatgccg
gtgagcggcgcttactccatcccgatgtccagcaactacaacgctttttgccggccggcg
gtggtcatggtcaaggacgggcaagcgagaattatcaagcggcgcgagactgtcgaggat
ctgctaaggacggatctgggatag
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