Dehalogenimonas formicexedens: Dform_00684
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Entry
Dform_00684 CDS
T04654
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
dfo
Dehalogenimonas formicexedens
Pathway
dfo03030
DNA replication
dfo03430
Mismatch repair
dfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dform_00684 (holB)
03430 Mismatch repair
Dform_00684 (holB)
03440 Homologous recombination
Dform_00684 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfo03032
]
Dform_00684 (holB)
03400 DNA repair and recombination proteins [BR:
dfo03400
]
Dform_00684 (holB)
Enzymes [BR:
dfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dform_00684 (holB)
DNA replication proteins [BR:
dfo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dform_00684 (holB)
DNA repair and recombination proteins [BR:
dfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dform_00684 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
AAA_22
FeoC
Motif
Other DBs
NCBI-ProteinID:
APV44039
UniProt:
A0A1P8F6D1
LinkDB
All DBs
Position
639977..641008
Genome browser
AA seq
343 aa
AA seq
DB search
MSNWRLIGQDNVVAFLARSLERGSLCHAYLFSAPEHSGKTALALKLAQTLNCTGNEPPCG
GCEPCRRISAGIHADVQVIGLAVNDDGKSKTEVTIEQIRAINHAASMPPYEGKCRVFIIE
EADRMSTGAANALLKTLEEPPPNVVFVLTTSRENLVPETVRSRCVKLKLASAPRTEISRY
LEKDLGFSAERAGLLARLSQGRAGWAIIAAADDVVLAERKDNLDRFAEALESGFDFRFEL
ASRLATRFGKSRAEIYRMLDQWLSFCRDLLLVKLDIKDEVVNTDYMSALETLSSRLGTAE
ARSIIGSLSNTRQYLEQNASPRLALEVLMLGLPLLGGSLKKSG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattggcgcttgatagggcaggataatgtggtcgctttcctcgcaagaagcctg
gaaagaggcagcctctgtcacgcctatttgttctcggcgccggaacactccgggaagacc
gccctggcgttgaagctggcccaaacgctcaactgcaccggaaacgagcctccatgcggc
gggtgcgagccctgccgtcgaatctctgccggcattcacgctgacgtccaggttattggg
ctggcagtcaacgacgatggcaagagcaagaccgaggtgaccatcgaacagatccgggcg
atcaaccatgccgcctccatgccgccttacgaaggcaaatgccgggttttcatcatcgaa
gaggcggaccggatgtctaccggcgccgccaacgcgctgctcaaaaccctcgaagaaccg
ccgccgaacgtcgtcttcgtgctgacgacctcgagagagaacctggtgccggagacggtg
aggtcgcgctgcgtcaaactgaagctggcctccgcgccgaggaccgagatctcccggtac
ctggagaaggaccttggtttttccgccgagcgtgccgggctgctggctcgactgagccag
ggcagggcgggctgggcgattatcgccgccgctgacgatgtggtgctggctgaaagaaag
gacaacctcgaccggttcgccgaagccctggaatccggattcgatttcaggttcgaactg
gcctcaaggctggcgacccgcttcggcaaatcgagagctgagatctaccggatgctggat
cagtggctgtcattctgccgcgatttattgctggttaaacttgacataaaagatgaagtg
gtcaatactgactatatgtccgcgctggaaacgctgtcatcccgattgggtacggctgaa
gcccggtcgatcatcggatcgctttcgaatacccggcaatacctggaacagaacgcctcg
ccgcgcctggccctggaagtcctgatgctcggcttgccattactcggagggagtctaaaa
aagagtggttaa
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