Dehalogenimonas formicexedens: Dform_00840
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Entry
Dform_00840 CDS
T04654
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dfo
Dehalogenimonas formicexedens
Pathway
dfo00300
Lysine biosynthesis
dfo00470
D-Amino acid metabolism
dfo01100
Metabolic pathways
dfo01110
Biosynthesis of secondary metabolites
dfo01120
Microbial metabolism in diverse environments
dfo01230
Biosynthesis of amino acids
Module
dfo_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dfo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Dform_00840 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Dform_00840 (dapF)
Enzymes [BR:
dfo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Dform_00840 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
APV44185
UniProt:
A0A1P8F6Y0
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Position
785208..786056
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AA seq
282 aa
AA seq
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MDFTKVQSVGNDFVLIETADTKSDWSILAGAVCNRHFGVGADGLLLLMPSDKADFRMRIF
NTDGSEAEACGNGLRCLVHYINAKNVSDAKNLTIETLGGVRKAEISGDSGKSRIRIGMGA
PIFEPHSIPVNTELGKGGLVCGMTVNYPFQAGNVPLKLGFVSMGNPHAVYFTDKPVNEFS
LAEIGPEVEKAPIFPRKTNFEVARVRSSRSIEMRVWERGVGETLACGSGACAVAVASWIM
GYTGDTVDITLPGGKLTAEWSGQGDVFLTGEAEIVFTGAWLK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggattttactaaggtccagagcgtcggcaatgattttgtgctaatcgagacggctgat
accaagagtgattggtcaattcttgccggtgcagtctgcaacaggcatttcggcgtcggt
gccgacgggctattgctgctcatgccttcggacaaggccgattttcggatgcgcattttc
aacaccgacggttcagaagctgaagcctgcggcaacggcttgcgttgccttgtccattat
ataaatgccaagaatgtgtcagatgccaaaaacctaacaatcgagactcttggcggggtc
aggaaagctgaaatctcgggcgattccgggaaatcaaggattcgcataggaatgggcgcc
ccgatatttgaaccgcactcaattccggtgaataccgaattgggtaaaggcggccttgtt
tgcggtatgacggtaaattacccatttcaagccggaaatgtacctctcaaactcggtttt
gtttccatggggaacccgcatgctgtttatttcacggataaaccggtgaatgaattttcc
ctagccgagatcggtccggaagttgaaaaggcgccgattttccccaggaagaccaacttc
gaggtcgcacgtgttaggagcagtcgttccatcgagatgagggtttgggaacggggcgtt
ggagagacgctcgcctgcggttcaggcgcctgtgccgtggctgtcgcaagctggataatg
ggctacactggtgatacagttgacataacgttacccggtgggaaattgaccgccgaatgg
tccgggcagggagacgtgttcttgaccggtgaggctgaaattgtgtttaccggcgcgtgg
cttaaataa
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