Dehalogenimonas formicexedens: Dform_00944
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Entry
Dform_00944 CDS
T04654
Name
(GenBank) elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
dfo
Dehalogenimonas formicexedens
Brite
KEGG Orthology (KO) [BR:
dfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfo03016
]
Dform_00944
Enzymes [BR:
dfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
Dform_00944
Transfer RNA biogenesis [BR:
dfo03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
Dform_00944
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Motif
Other DBs
NCBI-ProteinID:
APV44285
UniProt:
A0A1P8F783
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Position
complement(879927..881309)
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AA seq
460 aa
AA seq
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MKKLTRTISGVTPVAVMSRPAPCPGRCVYCPDFSDTPRSYTPHSPAVMRAVRYDYDPGAQ
VKARLRILSDMGHPTDKVELIVMGGTFLATPVDYQNSFIKSCFDALNGSTGVSLEDAQKT
NELSANRAVGLCIETRPDYCGDAEIERMIKWGTTRVELGVQTLDDNVYRLINRGHDVSAV
IGATARLRRAGLKVHYHWMPGLPGSTPENDLAMTKRLFNDPNFQPDGIKIYPTMVIENTE
LEKWQREHRYEPYNDETMIKLIAEMKINVPPYVRISRVLRDIPSEYITGGLKNSLRDGVK
SILQAQGLNCQCIRCREFGHRKTRNFTELVLRRREYEASGGKELFLSIEDETDTLFGLLR
LRIQDQEPDNLQHISERIAIVRELHVYGPELQFGEKGRNSAQHRGIGRQLLQVAEKIALN
EFGMEYIGILSGVGARNYYREHGYEFRSGYMIKQLKPPVS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctgacccggacaatttcaggcgtcaccccggtggcggtcatgagtcgaccc
gcgccatgtccggggcgctgcgtttattgccctgacttttcggacacacctcgcagttac
acgcctcactctccggcagtcatgcgcgccgtgagatacgactatgatccgggcgcccag
gtaaaggcccggctgcgtattctatccgacatgggacacccgacagataaagttgagttg
atcgtgatgggcggcacgtttttagccactccggttgattaccaaaacagttttataaaa
tcatgtttcgacgctttgaatggctctaccggcgtttctttggaagatgctcagaaaacc
aacgagttatcggctaacagggcagtgggcttatgcatcgagaccaggcctgattattgc
ggtgacgccgaaatcgagcgcatgatcaaatggggtactactcgggttgaacttggggtt
caaacccttgatgataacgtttatcgcttgatcaaccgtgggcacgacgtgtcggccgtg
attggagccactgctcgattgagaagagcgggtctgaaagtgcactatcactggatgccg
ggattgcccggatcgacgccggaaaacgatctggcgatgaccaaacgcctttttaatgac
cccaattttcagccggacgggattaaaatctatcccactatggtcattgaaaatacggaa
ctggaaaaatggcagcgcgaacaccggtatgaaccttataatgacgaaacaatgatcaag
ctgatcgcggagatgaaaataaacgttccaccgtatgtcaggatttcacgggttctaaga
gacattccctctgagtacattaccggggggctcaagaactctttgagggacggggtaaag
agcatacttcaggcgcaggggctcaactgccaatgtatcaggtgccgcgagtttggtcac
cggaagaccaggaatttcaccgaactggtgcttcggcggcgcgaatacgaagcgtcaggg
ggcaaagagctatttctttcgattgaggatgaaacggacaccttgttcggattgctcagg
ctcaggattcaagatcaggagccggataatcttcaacacatctcagaacgaattgcgatc
gtgagagaactacatgtttacggccctgaactccagtttggagaaaaaggacgcaactcc
gcccagcacaggggtataggcagacaattactccaggtggctgaaaaaatagctctaaac
gaatttgggatggaatatatcggcatattatcgggcgtgggagcacgcaattattacagg
gaacatggttatgaatttcgttccggatatatgatcaaacaacttaaaccacctgtctcc
tga
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