Dehalogenimonas formicexedens: Dform_01027
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Entry
Dform_01027 CDS
T04654
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dfo
Dehalogenimonas formicexedens
Pathway
dfo00061
Fatty acid biosynthesis
dfo00071
Fatty acid degradation
dfo01100
Metabolic pathways
dfo01212
Fatty acid metabolism
dfo02024
Quorum sensing
dfo04146
Peroxisome
Module
dfo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dfo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Dform_01027
00071 Fatty acid degradation
Dform_01027
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Dform_01027
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dform_01027
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dfo01004
]
Dform_01027
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dfo04147
]
Dform_01027
Enzymes [BR:
dfo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Dform_01027
Lipid biosynthesis proteins [BR:
dfo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Dform_01027
Exosome [BR:
dfo04147
]
Exosomal proteins
Exosomal proteins of breast milk
Dform_01027
Exosomal proteins of breast cancer cells
Dform_01027
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
SH3_2
SH3_1
Motif
Other DBs
NCBI-ProteinID:
APV44363
UniProt:
A0A1P8F7F3
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All DBs
Position
complement(955099..957009)
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AA seq
636 aa
AA seq
DB search
MGVFTSLDPQTIPGLIKRNAERWSDKAAMCYKNLGVWHRYTWADYFTSVRHFSLGLLSLG
LKTGDVVAIIGDNEPEWFWGEFAVQAAGAIPTGIFVDAVPDEVKFVVNHSGATFAIVNDQ
EQADKFLEIRDAAPQLKKVIYWDPKGLKNYDDPLLIGFIEVIAMGREYEKNYPGVFEEKL
SRVKPADTAFIYYTSGTTGQQKAAILTHKALIATASGFVTRYPLDQKSDLISNFPAAWVG
DSFFATIPHILSGARLNFPEEPETIAADTREIGPHFAIYGPRQWEGIVSDIQVKMMDAHP
FKKLAYKAFLPVGYRLAEAKLSGVEPNIFWKSLGRVSDGLMFHPLKDKLGLSRVRWAVTG
SSVLALDTFKLIHAIGIELRQNYASTEAGFIASHGQGDIAFESVGRPALNTEVRLTNEGE
LFVRSDCMFSGYYKDEAKTKESFAPGGWFKTGDAVNINEAGHIIFLDRLKDMGELKSGVK
FAPQYIEGRLRFSPYIKDAMVLGDKDKDYASAVINIDFAMVSKWAQNNRLNFTTYVDLSQ
KKEIADLVSKDVARVNSFLPENSRVKKFVILHKEFDPDEAELTRTRKLRRGAVYQKYADL
IEAMYGERKDVVVEAPVTYRDGRKGVVTTSIKVRGL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgggggtattcaccagtttggatccacagaccataccgggcctcataaaacgaaatgcc
gagcgttggtcggacaaggcggccatgtgctacaagaacctcggcgtgtggcaccgctac
acctgggcagattatttcacctcggtcaggcatttttcgctggggttactgagcctgggt
cttaagaccggagacgtcgtcgccatcatcggcgacaacgaaccggaatggttctggggc
gagtttgccgtccaagcagctggggcaatcccaacgggtatttttgtagacgccgtgcct
gacgaggtcaaattcgtcgtcaatcactcgggagcaactttcgctatcgtcaatgaccag
gaacaagccgataaattcctggagattcgggacgccgctccccagttgaagaaagtcatc
tactgggacccgaaagggctcaagaattacgacgacccgctccttatcggattcattgaa
gtaatcgcaatgggccgggaatacgaaaagaactaccccggcgtgtttgaagaaaaattg
tcccgggtcaaacctgcagacaccgctttcatctactacacctccggcaccacgggacaa
cagaaagccgcgattttaacccataaagcgcttatcgccaccgcctccggtttcgttacc
cgctatccgctagatcagaagagcgatctcatttccaattttccggcggcatgggtcggc
gatagtttttttgccaccatcccgcacattttgtccggggcgaggttgaactttcccgag
gaaccggaaaccattgctgccgacaccagggaaatcgggccgcatttcgccatttacggc
ccgaggcaatgggagggcatcgtttccgatatccaggtgaagatgatggatgcccaccca
tttaagaaattagcctataaagcctttctgccggtcggttataggctggctgaagccaaa
ttatcgggtgtcgagcccaatattttctggaagtcgctcggaagggtctccgatgggctg
atgttccatccgcttaaagacaaactaggtctttcgcgagtgcgctgggcggttactggc
tcatcagttttggcgctggatactttcaagctcatccatgccatcgggatagaactccgg
cagaattacgcttcgaccgaagccggattcatcgcttcccacggccaaggcgatatcgct
ttcgaaagcgtcggccgccccgctttgaataccgaagttcgccttaccaatgaaggtgaa
ctgtttgtccgctccgactgcatgttctccggttattacaaggatgaagccaagaccaaa
gaaagcttcgctcccggcggttggttcaaaaccggagatgcggtcaacatcaatgaggcc
ggacatattattttcctggatcgactcaaagacatgggtgaactgaagagcggcgtcaag
ttcgcccctcaatacatcgaaggccggttgaggttttcaccgtacatcaaggacgcaatg
gtcctgggtgacaaagacaaggattatgcctcagctgtcatcaacatcgattttgccatg
gtaagcaaatgggcgcagaacaatcgcctcaatttcaccacttacgtcgatctgtctcag
aaaaaggagatcgcggatcttgtttctaaagatgtcgcccgagtcaacagctttttacct
gaaaactcacgagtgaaaaaattcgttattttacataaggaatttgacccggatgaggct
gaactcacccgcacgcgaaagttgcggcgtggggctgtgtaccagaaatacgccgatctt
atcgaagcgatgtatggcgagcgtaaggatgtggtagtagaagcccctgttacttatcgc
gacgggcgtaaaggcgttgtgactacttctatcaaggtgaggggactgtaa
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