Dehalogenimonas formicexedens: Dform_01208
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Entry
Dform_01208 CDS
T04654
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dfo
Dehalogenimonas formicexedens
Brite
KEGG Orthology (KO) [BR:
dfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfo03016
]
Dform_01208 (truB)
Enzymes [BR:
dfo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Dform_01208 (truB)
Transfer RNA biogenesis [BR:
dfo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dform_01208 (truB)
Prokaryotic type
Dform_01208 (truB)
BRITE hierarchy
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
APV44540
UniProt:
A0A1P8F7W1
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Position
complement(1156139..1157029)
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AA seq
296 aa
AA seq
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MLLDGWLNIDKPPGMTSYGVIARLKRLTGQRHIGHAGTLDPLATGILPVAFGQAARTIEF
LHQVSKTYRAVIELGVETDTLDAEGNILFRRDASSVSHEMVNSALESFTGTIQQVPPMFS
ALKRNGVPLYEIARRGETVELKPRTVTVYNIQLLAFDPPFVTLEVDCGSGTYIRSIARDL
GQVLGVGACLKSLRRTRYGVFDIKGSIELASLETAGMVAARLLPPGYPLAHCPAVYAGFE
STERITHGVIPAEVQSQITEARTYRLCSQDGALLAIIDATGADLRLKVFNLTAGDT
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgttgctcgacggctggttgaacatcgataaacccccgggtatgacctcttacggggta
atcgcccggctgaaacggctgacaggccaaagacatatcggccatgcagggacccttgac
cccttggctaccggcatccttccggtagctttcggccaggcagcccgcactatcgagttt
cttcaccaggtctccaaaacatatcgcgccgtgattgaactcggggtcgagaccgataca
ctggacgccgagggcaacatcctgttcaggcgcgatgcctcaagcgtaagccatgagatg
gtgaactcagccctggagagtttcaccggcaccatccagcaagtaccgccgatgttttcc
gcgctcaagcgaaacggcgttcccttatatgaaatcgcccgccggggcgagacggtcgaa
cttaaacccaggacggtgaccgtctataatatccagctattggccttcgatccgcctttt
gtaacgctcgaggtcgattgcggctccggcacttatatcaggtctatcgcccgagacctg
ggacaggttctgggggtgggggcttgcctgaaatccttgaggcgtaccaggtatggtgta
tttgacataaaaggaagcattgaacttgcaagtttggaaacggcgggcatggttgcagcg
cggcttttaccgccagggtatcccttggcgcactgtccggcggtgtacgccggttttgaa
tcaaccgaaaggattacccacggagtaatacccgcggaggtgcagtcccagatcaccgaa
gccaggacgtaccgcctttgcagccaggacggggcgctgctggcgataatcgatgctacc
ggcgcggatttacggttaaaggtgttcaatctgacggccggtgatacctaa
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