Dehalogenimonas formicexedens: Dform_01212
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Entry
Dform_01212 CDS
T04654
Name
(GenBank) N utilization substance protein A
KO
K02600
transcription termination/antitermination protein NusA
Organism
dfo
Dehalogenimonas formicexedens
Brite
KEGG Orthology (KO) [BR:
dfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfo03021
]
Dform_01212
03009 Ribosome biogenesis [BR:
dfo03009
]
Dform_01212
Transcription machinery [BR:
dfo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Dform_01212
Ribosome biogenesis [BR:
dfo03009
]
Prokaryotic type
rRNA transcription factors
Dform_01212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_NusA_C
RRP4_S1
KH_2
Motif
Other DBs
NCBI-ProteinID:
APV44544
UniProt:
A0A1P8F7U3
LinkDB
All DBs
Position
complement(1159491..1160981)
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AA seq
496 aa
AA seq
DB search
MKSDFMLAITQLSAEKNLSKEVVLAAVEAALVSAYRKESFAPNQNIQAKIDPATGRVKVW
AEKTVVEKVEDPRKEITLAEAKRVQPGIQLGEPVVVEATPADAGRIAAQTAKQVILQRLH
EAENTAIVDEYAGKAGDIVSGVIQRIEPKQIIVDLGRAEAVMPLQEQVHTERYRPGQRIR
AYLVEVAKGIKGPTVVLSRSHPGLLRRLFEMEIPEIFSGMVEIKSVAREAGARSKVAVAA
RQTGIDPVGCCVGLRGIRIQNIVSELSGEKIDVVAWSPDPAVFIASALSPAQVVRVILSE
SDKSATAVIPDRQQSLAIGKEGQNVRLAVKLTGWRIDIKSVSDYEAAHPVVTPEAVVRTP
EVVTPAAVEKAPEKPVEKAAEKTPVKHIEKPEKPVEAAPAAPAAEPVIPEPVAAAAPVAP
GPVEEEVGLKLSLNAPERAPVGAGSKSGVRFAEDILGRSGDRGAEKKKRKGKDDEGGRGK
KKRSGGAGEFDTDEYD
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcgacttcatgctcgctatcactcaactctccgccgagaaaaacctttccaaa
gaggtggtactggcggcggttgaggcggcgctcgtttccgcctaccgcaaagagagtttt
gcccccaatcaaaatatccaggccaagatcgatcccgccaccgggcgggttaaggtctgg
gctgaaaaaacagtcgtcgaaaaagtcgaggatccccgcaaggagataaccctcgccgaa
gccaagcgcgttcaaccgggcatccagctgggcgaaccagtcgtggtcgaagccaccccc
gccgacgccggacgcatcgcggctcaaactgccaagcaggtaatcctgcagaggcttcat
gaagcggaaaataccgctattgtcgatgaatacgccggaaaagccggagatatcgtttcg
ggcgtcattcagcggatcgaacccaagcagatcatcgtcgatctgggacgcgctgaagcg
gtcatgcccctccaggaacaggtacataccgagcgttacaggccgggacagcgcatccgc
gcttaccttgttgaagtcgccaagggtatcaaaggccccaccgtggtgctgtccagatcg
cacccggggctgctgcggcgtttgttcgagatggagatcccggagattttcagcggcatg
gtggaaatcaaatctgtcgcccgggaagccggcgctagaagcaaggtcgccgtcgccgcc
cggcagacagggatcgaccccgtcggttgctgcgtgggacttcgcgggatccgcatccag
aatattgtctccgagctaagcggggaaaagatcgatgtcgtcgcctggagcccggacccg
gcggtgtttatcgccagcgccttatctccggcccaggtggtcagggtcatcctgtccgaa
tccgataagtcggccaccgccgtcatccccgaccggcagcaaagcctggctatcggcaag
gaaggccagaatgtccggctggcggtcaaactgaccggctggcgcatagatatcaagagc
gtctcggattatgaagcggctcacccggtggtcacgcctgaagctgtggtcaggacacct
gaggtcgtaaccccggcggccgtggaaaaagcgccggaaaaaccggtcgaaaaggcagcc
gagaagaccccggtcaagcatattgaaaagcctgaaaagcccgttgaggcagcgcccgcg
gctccggccgccgaaccggtgataccggaacctgtggctgcggctgcgccggtggcgcct
ggcccggtcgaagaagaagtcggccttaaactatcgctcaacgcgcccgaacgcgcgcct
gtcggcgccggcagcaagtccggggtacgctttgccgaggatatcctgggacgttcaggt
gaccgtggcgccgagaagaagaagcgaaaaggtaaggatgacgaaggcggccgcggcaag
aagaaacgctccggcggcgccggcgagttcgacaccgatgaatacgattaa
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