Dehalogenimonas formicexedens: Dform_01355
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Entry
Dform_01355 CDS
T04654
Name
(GenBank) PAS domain S-box-containing protein
Organism
dfo
Dehalogenimonas formicexedens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_4
PAS_9
PAS_8
PAS_3
Response_reg
HATPase_c
HisKA
HATPase_c_5
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
APV44679
UniProt:
A0A1P8F877
LinkDB
All DBs
Position
1287438..1290446
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AA seq
1002 aa
AA seq
DB search
MVSSHENLREVEFLEHIVNSTAACVAVVEGRELRYTLVNSKFQEFHPQPLTGRRYRDAFP
EAAAAGAEAKMLAVLETGEPWDVVNYPAKVPLKPDAVWEGRVVRLTVTEGREPSLLAVFW
DVTERAKAEEESLAKTRLNQILLDAFPCVALLLRPESHVIVAMNKKAALEGCVIGQTCYG
SWAKRSTPCPWCLAPVVWKTGKPQSSEPSDGGITWDAHWIRISEDLYMHFAFDITDRRKV
EKALIESETKYRELFENAQIGMFISRLDGSEMLDANERYLEMLGLSRAEFIGKPSRDFWA
NPLQREKMVNILKSEGRVTNFECQLITKHNGVRDFLTSLTLNPDNKTLHGSIIDITERKK
AEDDLNESEHFTRTLLNTTPELIYVHDIRTNSNVYANRSVMDFLGYTSGEVQAMGSSLFN
NILHPDDANLVAVHHSRCAHASDDDILELTYRMKNRDGKWRYLRSRDVPFRRDTVGNVTQ
ILGVTEDITEQLMKSRMVEESEAKFRAVFENAHEGIVLIDYESGTIVDCNPEYERQTGRD
QATLKKMKIWEIRPPDQKEQNKVIFERIKKTGGGRSSETGYQRPDGTIIPIEFTSSIVEM
SGRKYFLGVTRDISEKKKAEIEQQRFRDKAEMAARLAAVGEMASGIAHEINNPLTGVVGF
SELLVERDDLPDEVREDLKIIRDGGRRVKEIVGRMLTFARQQKPLRVASSITELIDNTLE
IRSYVLKTANIEVIKDYSPNLPWLIVDPGQLQQVFLNIIVNAEYAMKQAHNRGKLTIKAE
NCGEIVRFSFTDDGPGMSRETLSKLFQPFFTTKAPGEGTGLGLALSYGIIKEHDGTIKAE
SSEGCGSTFVIDLPIGFSVLPVQEGDSTNPVASIRFASSNSRVLVIDDEDTVRSVTKAIL
ERNGYDTATEPDPLVALERLKTEHFDAVLCDIRIPDLSGMELYERLIRENPELAKKVIFI
TGDVSDAATREYLESHDIPFITKPFDQDSLLNKIWDITSKGG
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgtcacacgaaaatctgcgtgaagttgaattcctggagcacatcgtcaacagt
accgctgcctgcgtcgcagttgtcgaaggccgagagcttcgctacaccttagtcaactct
aagtttcaagaattccatcctcaacccctgacgggacgaagatacagagatgccttccct
gaagccgccgccgcaggcgcggaagccaaaatgcttgccgttctcgaaaccggagaacca
tgggacgttgttaattatccagccaaagttcctttgaaaccagatgccgtctgggagggg
agagtcgtccgtctgaccgtgaccgagggaagggagccatctctccttgcagtgttctgg
gatgtcactgaacgcgcaaaggctgaagaggaaagcctcgccaaaacccggttaaatcag
attttattggacgctttcccatgcgtagcgctgttgctcaggccggaatctcacgtgatc
gtcgcgatgaacaagaaagccgctctggaaggatgcgtcatcggccagacctgctatgga
agttgggcaaagcgaagtaccccttgtccatggtgcctggccccggtggtctggaaaacc
ggaaagccccaatcttccgaaccaagcgacggcggcataacctgggatgcacattggata
cgcattagtgaagacctttatatgcatttcgcgttcgacatcaccgatcgcagaaaagtg
gaaaaagcgctgatcgagagcgagactaaatatcgcgagctcttcgaaaacgcgcagata
ggtatgtttatttcaaggcttgacggctccgaaatgctcgatgcaaacgagagatacctt
gagatgttaggtctgtctcgcgccgaattcatcgggaaaccctcccgggatttctgggct
aatcctctccagagagagaaaatggtcaacattcttaagtccgagggcagggtaacaaac
ttcgaatgccaactgatcaccaagcataatggggtacgtgatttccttacatcgctaaca
cttaacccggataacaagacgctccatggatcgattatcgatattacagagcgcaagaag
gccgaagatgacttaaacgaaagcgaacacttcacccggacgctgttgaataccaccccg
gaactgatctatgtccacgacattaggacgaacagcaatgtgtatgccaaccgttcggta
atggatttcctgggctacacttccggagaggtgcaagccatgggatcatcgctcttcaat
aacattctgcaccctgacgatgcgaacctggtggccgtccatcattccagatgcgctcat
gccagtgatgacgatatcctggaattgacttaccggatgaagaacagagacgggaaatgg
cgttaccttcgatcccgagatgtgcccttcaggcgagataccgtgggaaatgtcacccag
atcctcggcgttacagaagacatcaccgaacagctgatgaaatcccggatggtcgaggag
agcgaagccaagttccgggcggtattcgaaaatgcccacgaaggtatagtgcttatcgac
tacgaaagcgggacgattgtcgattgtaatccggagtatgagcgacagactggaagagac
caggcgaccctgaagaagatgaagatatgggaaattcgcccgcctgaccagaaagaacaa
aacaaagttatcttcgaaagaatcaagaagacaggtggaggacgatctagcgaaaccggc
taccaaaggcctgatgggactatcattccgatagaatttacgtcgtcaatcgtagagatg
agcggccggaagtattttctcggcgtcacgagggatatttccgaaaagaaaaaggctgag
atcgagcaacaacggtttcgcgataaagccgagatggctgcccgcctggcggctgtgggc
gaaatggcctcaggcatagcccatgagataaataatccgctaaccggagttgtcggtttc
tccgaactgctcgttgagagggatgacctgcccgatgaggtaagggaagacctcaagatc
atccgagacggaggccggcgggtcaaagagatcgtcggacggatgcttactttcgccagg
cagcaaaaaccgttaagggtggccagttccatcaccgaacttatcgacaacacccttgaa
atcaggtcctacgtacttaagacggcaaatattgaagtgatcaaggactactctccaaac
ctgccgtggcttatagtggatccggggcaactacagcaggtatttctcaacatcatagtc
aatgccgaatatgccatgaagcaagcccacaatagaggcaaacttaccatcaaagcggag
aactgtggcgaaatagtccgcttctcctttaccgatgatgggccggggatgagccgggaa
acgctaagcaaacttttccagcctttctttaccaccaaagcgccgggtgagggtaccggg
ctaggtttggcgctctcttacggcataatcaaggagcatgacggcacaattaaggccgag
agctccgaggggtgtggttccaccttcgttatcgatctgccgatcggtttttcggtgctc
cctgtccaggaaggagactcaacaaaccccgtggcgtctattcgttttgcgagtagcaac
tctcgtgtgttagttatcgacgatgaagacactgtgcgctctgtaaccaaagcgatattg
gagaggaatggttacgatactgcgacggaacccgacccgctcgtagcgctggaacgtttg
aaaactgaacatttcgacgcagtcctatgcgacatcagaatccccgatctttccgggatg
gagttgtatgaaaggctgatccgggaaaaccccgagctggccaaaaaggtaatatttatc
acaggcgacgtttccgacgcagcaaccagggaatacctggaatctcacgatataccgttt
atcaccaagcccttcgatcaggattcattgctcaataaaatatgggatatcacctcaaag
ggtggttga
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