KEGG   Dehalogenimonas formicexedens: Dform_01592
Entry
Dform_01592       CDS       T04654                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
dfo  Dehalogenimonas formicexedens
Pathway
dfo03030  DNA replication
dfo03410  Base excision repair
dfo03420  Nucleotide excision repair
dfo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dfo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Dform_01592 (polA)
   03410 Base excision repair
    Dform_01592 (polA)
   03420 Nucleotide excision repair
    Dform_01592 (polA)
   03440 Homologous recombination
    Dform_01592 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dfo03032]
    Dform_01592 (polA)
   03400 DNA repair and recombination proteins [BR:dfo03400]
    Dform_01592 (polA)
Enzymes [BR:dfo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Dform_01592 (polA)
DNA replication proteins [BR:dfo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Dform_01592 (polA)
DNA repair and recombination proteins [BR:dfo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Dform_01592 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Dform_01592 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 baeRF_family2 HHH_2
Other DBs
NCBI-ProteinID: APV44913
UniProt: A0A1P8F8Z8
LinkDB
Position
1517846..1520614
AA seq 922 aa
MTHRAEPAPSKPRIVLFDASALVHRAFHAFAHGRQLTISGTGEVTSAVFGFTNILLKVLA
DLKPDCYAIAFDRKGPTFRHEMSAEYKAHRPPTPSELITQLGRVHQLVEAFDMPIFEQQG
YEADDLLGTVARRAEADGAEVVIVTGDADAMQLVDDDVKVLYPKPGGTFSDTILYNAEAV
KGKFGVPPNRVADYKALVGDSSDNIGGVPGVGQKTAVKLLTEFDGIDEIYQNIELIRPEK
LRELLRREEKAARDSLKLATIVTDLPIEFDIDKCQICRLNREKAIPLLRELEFTSLINRL
PKADSAGKGTAQPESPEAIPTPPSIECQYTLVDTIEKLNHLVQKLAGTGKFALDTETTSL
DTLTADLVGLSIATAPGESFYLPVGHVGVEGTQLELFEVKRALGPVLAEKKITKIAHNAK
FDLQALQTAGFAVNGLDFDTMLAAHLLGEKAPGLKNLASTRLHVEMTPITELIGEGKSQI
CISRCGLKETSDYSCADADMTFRLAGNLEPELKNQNQWKLFSEVEMPLVPVIMDMERAGI
ALDTERLGKMSIDLGGQLKNIENEIYSLAGHEFNIASPKQLGDVLFGELHLPSGRKTKTG
YCTDAAVLDELKDEHAIVRKVLEFRTLTKLKSTYVDVLPAMISPRDGRLHTSFNQARTAT
GRLSSSDPNLQNIPVRGELGREIRKAFVAPPGYALLAADYSQIDLRALAHLSGDPDLIAA
FNHDEDIHTATAMRLYEVPKEAVTKDMRRFAKTVNFGVIYGMSDYGLEQATELTRTQSSE
FITRYFERYPGVKTYLEATKEQARSRGYVETILGRRRYIPEINASNRQVREAAERMAINM
PVQGTSADIIKVAMLHVIREMKERKLKSRLLLQVHDELIFEVPQHELIFMSEMAPRLMAA
AVELAVPLKVDMKYGANWGAME
NT seq 2769 nt   +upstreamnt  +downstreamnt
atgacccatcgtgccgaaccggcccccagcaaacctcgaatcgtccttttcgacgccagc
gccctggtgcaccgcgctttccacgccttcgcccacgggcggcagctcactatctccgga
accggcgaagtcacctcagcggtcttcggtttcaccaatatcctgctgaaggtcctggcc
gatcttaagcccgactgctatgctatcgccttcgaccgcaaggggccgaccttccgacac
gagatgtcggcagaatataaggctcaccgcccgccgaccccgagtgaactcataacccag
ttgggccgggtgcaccagttggtggaggccttcgacatgccgatattcgaacaacagggt
tacgaggctgacgacctcctggggactgttgcccgcagggcggaggcggacggggcggaa
gtggtgatcgtgactggggatgccgatgccatgcagcttgtcgatgacgacgtcaaggtg
ctttatcccaagccgggaggcactttctccgataccatcctctataacgccgaagccgtc
aaaggcaagttcggcgtgccgccaaatcgggtcgccgattacaaggccctggtgggcgat
tcttcggataacatcggcggcgtacccggggttggccagaagacggcagtgaaacttctg
accgaattcgacggcatcgacgagatctaccagaatatcgaactcatcagacccgaaaag
ctgcgggagctgttgcggcgggaggaaaaagccgcccgggacagcctgaagctggccacc
attgtcaccgatctgccgatcgagttcgacatcgacaagtgccagatctgccgccttaac
cgggaaaaggccattccgctgctgcgtgaactggaattcaccagcttgatcaaccgcttg
ccgaaggccgacagcgcgggcaagggtacggcgcaaccggagtcgccggaagcgatcccg
acaccaccgtccatcgaatgccaatacacgcttgtcgacaccatagagaaattgaaccat
ctggtacaaaagcttgccgggaccggcaaatttgccctggataccgagacgacaagcctc
gacactctgaccgccgacctggtcggactttcaatcgcgacagcccccggcgaaagcttt
tacctgccggtgggccatgtgggggttgaaggcacccagcttgaattgttcgaggtcaaa
agggctttaggcccagtcctggcggagaaaaagatcaccaagatcgcccacaacgccaag
ttcgacctccaggcgttgcagacagccggtttcgccgtcaacggcctggacttcgacacc
atgctggccgctcacttgttgggggaaaaggcgcccggactcaagaacctggcttcgacc
cgccttcatgttgaaatgacgcctattaccgaactcatcggggaaggcaaaagccagatc
tgcatctctcgctgcggtttgaaggagacgtcggattattcctgcgccgacgccgatatg
actttccggctggccgggaaccttgaaccggagttgaagaaccagaaccagtggaagctc
ttttccgaggtcgagatgccgctggtaccggtcattatggacatggaacgcgccggaatc
gctttagataccgaacggctggggaaaatgtcgatcgacctaggcgggcagctcaagaac
atcgaaaacgagatttattccctggcggggcacgagttcaacatagcgtctccgaagcag
cttggcgacgtcttgttcggggaacttcacctgccttcaggcagaaaaacgaagaccggt
tactgcaccgatgccgccgtgctcgacgaacttaaagacgagcacgccatagtccggaaa
gtcctggaattccgcaccctgacaaagctcaaatccacctatgtcgacgttctgccggcg
atgatctcgccccgcgacgggcgcctgcacaccagcttcaaccaggcccgcaccgcaacg
ggcaggctttcttcgagcgatcccaatctgcaaaacataccggtccgcggcgagctggga
cgcgagatccgcaaagccttcgtggcgccgcccgggtatgcgctgctggccgcagattat
tcccagatcgatctccgggcgctggcccatctttccggcgaccccgacctgatagccgcg
ttcaaccacgatgaggacatccataccgccacggcgatgaggctctacgaggtaccgaag
gaagccgtgaccaaggacatgcgccgttttgccaagacggtgaatttcggcgttatttac
ggcatgagcgattacgggctggaacaggcaacggagctgacccgtacccagtcttccgag
ttcatcaccaggtatttcgaacgttatcccggcgtaaagacctatctcgaggccaccaag
gaacaggccaggtcgcgcggctatgtcgagactatccttggccggcgccgctacataccg
gagatcaacgcctccaaccggcaggtgcgggaagccgcggagcggatggcgatcaacatg
ccggtccaggggacttcggcggatatcatcaaggtggccatgttgcacgtaatccgcgag
atgaaagagcggaaactcaagagccgcctgctgctccaggttcacgatgagctgattttc
gaagtgccgcaacacgagctcatcttcatgtcggaaatggcgccccgcctgatggcggcg
gcggtggaactggccgtcccgctcaaggtagatatgaaatacggagccaactggggagcg
atggaatag

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