Dyadobacter fanqingshengii: NFI81_04520
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Entry
NFI81_04520 CDS
T08895
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
dfq
Dyadobacter fanqingshengii
Pathway
dfq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NFI81_04520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfq03021
]
NFI81_04520
Transcription machinery [BR:
dfq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NFI81_04520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_24
HTH_11
Sigma70_ECF
DUF2603
HTH_Mga
HTH_40
HTH_DeoR
MarR
HTH_23
Motif
Other DBs
NCBI-ProteinID:
USJ37039
LinkDB
All DBs
Position
complement(1147217..1147735)
Genome browser
AA seq
172 aa
AA seq
DB search
MNLLKDGDDRNAFNELYVRYWKVIYDIGYKKLHNASLAEDLVHDLFVDIWNKRQEITIHS
TFIGYLHTMLINRLIDQNRKEAFRLRVQQDILERTPVNENQFFDAVASDDIEKQLMAEVE
NLPADMKTIFLLSRREHLSTIEIAQKLSLSPQTVKNQISNAIRRLRLKELHL
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttgaaagatggggatgacagaaacgccttcaacgagctgtatgtgcgctat
tggaaggttatttatgacataggttataaaaaactgcataatgcttcccttgcggaagat
ctcgttcacgatctttttgtcgatatctggaacaagcggcaggaaataacgattcacagc
acattcatcggctatctccataccatgctgattaaccggcttattgatcagaaccggaaa
gaggcgtttcgtttacgcgtgcagcaagacattttggagcgaaccccagtgaatgaaaac
cagtttttcgatgctgtcgcgtccgatgatattgaaaagcaattgatggcggaagttgaa
aatctaccggctgatatgaaaacgatatttttgctgagccggcgcgagcatttgtctacc
attgaaatcgcgcaaaaattatctttatctccccaaacagtcaaaaaccagatcagcaac
gccatccggcggctccggctgaaagaattgcatttgtaa
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