Dyadobacter fanqingshengii: NFI81_05720
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Entry
NFI81_05720 CDS
T08895
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
dfq
Dyadobacter fanqingshengii
Pathway
dfq03030
DNA replication
dfq03430
Mismatch repair
dfq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NFI81_05720 (holA)
03430 Mismatch repair
NFI81_05720 (holA)
03440 Homologous recombination
NFI81_05720 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfq03032
]
NFI81_05720 (holA)
03400 DNA repair and recombination proteins [BR:
dfq03400
]
NFI81_05720 (holA)
Enzymes [BR:
dfq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NFI81_05720 (holA)
DNA replication proteins [BR:
dfq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NFI81_05720 (holA)
DNA repair and recombination proteins [BR:
dfq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NFI81_05720 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Arnt_C
AAA_lid_RFC1
Motif
Other DBs
NCBI-ProteinID:
USJ37273
LinkDB
All DBs
Position
1440786..1441805
Genome browser
AA seq
339 aa
AA seq
DB search
MAQTPDIVLKEIRSKKFRPIYFLHGDEPYYIDSIAEELEKRVVPESEKGFNQFVLYGKDT
DMAGVLSYARRFPFMAERQLILVKDANKLGGIEQKEQQARLEDYAANPLNSTVLVFCFHA
NADERKTFIKSINTNGVVVQSKKMYDNKLPEWVTSFCQHEGVKISPKAVQMLVDNIGNDL
KRLSNEIRKIMVNLRVDEGIDASAIERFVGISKEYNVFEFQKALMTRDVMKANQIATYFS
ANSKDNPLAPILIILFGFYTKVLLAHASKDKTEKGLATELGVNPYFVKDYLLAIRNYPLP
KVANIIHYLRECDARLKGLDGVSIPEGELLKELVFKIVH
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaacaccggatattgtccttaaagagatcagaagtaagaaattcaggcccatc
tatttcctgcacggcgacgagccgtattacattgattccattgccgaagagctggaaaaa
cgcgtcgtgcctgagtctgagaagggctttaaccagtttgttttatatggaaaagacacg
gatatggctggcgtgctgagttatgcaaggcgtttcccgtttatggccgagaggcagttg
attttggtaaaagatgccaataagctgggtgggattgagcagaaagagcagcaggccagg
cttgaagattatgctgctaatccgctgaacagcacggtgctcgttttttgttttcatgcc
aatgccgatgagcgcaagacttttatcaaatccattaatacgaatggtgtggttgtgcaa
tccaaaaagatgtacgacaataaattgccggaatgggtcacttctttttgtcagcacgaa
ggcgtgaaaatcagtccgaaggccgtgcaaatgctggttgataacattggcaatgatttg
aagcgactatccaacgagatcaggaaaataatggtcaacctgcgcgtggatgaaggaatt
gatgcttcggccattgaacggtttgtggggatcagtaaggaatacaatgtatttgaattt
caaaaggcattgatgacgcgtgatgtcatgaaggccaatcagatcgccacttatttctca
gcaaattcaaaggacaatccgctggcgccgatactcattatcctttttggattttacaca
aaagtgcttcttgcgcacgccagcaaagacaagacagaaaaagggcttgctaccgaactt
ggcgtaaacccgtattttgtaaaggattatctgcttgcgatccgcaattatccgctaccc
aaagtggccaatatcattcactatttgcgggaatgtgatgccaggctcaaagggctggac
ggcgtgagcattccggaaggtgagctgctcaaagaattggttttcaaaatcgtacattaa
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