Dyadobacter fanqingshengii: NFI81_05765
Help
Entry
NFI81_05765 CDS
T08895
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dfq
Dyadobacter fanqingshengii
Pathway
dfq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NFI81_05765 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfq03019
]
NFI81_05765 (pnp)
03016 Transfer RNA biogenesis [BR:
dfq03016
]
NFI81_05765 (pnp)
Enzymes [BR:
dfq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NFI81_05765 (pnp)
Messenger RNA biogenesis [BR:
dfq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NFI81_05765 (pnp)
Transfer RNA biogenesis [BR:
dfq03016
]
Prokaryotic type
tRNA degradation factors
NFI81_05765 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH-I_KHDC4-BBP
S1_RRP5
KH_2
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
USJ37281
LinkDB
All DBs
Position
1448410..1450548
Genome browser
AA seq
712 aa
AA seq
DB search
MLFNIVTKTIPLPDGREITIETGKLAKQADGSVVVRLGNTMLLATVVANKDIKEGLDFLP
LSVDYQEKFASAGRIPGSFQRREGRLSDPEVLISRLVDRVLRPLFPDDYHAEVQVNILLM
SADATALPDALAALAASAALAASDIPFGGPVSEVRVAKIDGQYVVNPGSADLERATLELM
VGATYDDIAMVEGEMSEVSEEEVVEALKVAHEVIKKQCLALKEFEAAVGKTEKREYVGDA
ADEALEARLRAFAYDKIYAVTQLGSTNKTVRKDGFKAVWEEFTASIPEDEEGFDKGLAKR
YFNDLVWEASRRLVLDERIRLDGRKLDEVRPIASEVDFLPNAHGSALFTRGETQSLTTVT
LGTKNDEQIVDTPMKYGYSKFMLHYNFPGFSTGEVKPNRGPGRREVGHGNLALRALKKVL
PVAEDNPYTIRIVSDILESNGSSSMATVCAGSLALMDSGLKIKAPVSGIAMGLISDEKTG
KYAVLSDILGDEDHLGDMDFKVTGTEKGITACQMDMKVNGLSFEVLTEALMQAKAGRLHI
LGEMNKTMTESRADLKPHTPRAIVIKIDREMIGAVIGPGGKVVQDIQKESGATVSIEEKD
GAGFVSIFSADKTSMDKAVTRIKGIILVPEIGEVYSGKVKSIMPFGAFVEFLPGKDGLLH
ISEIKWERLEKMDGVLEVGEEVQVKLVEIDKKTGKYRLSRKVLLPKPENKND
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgctctttaatatagttacgaagactatacccttaccagacggcagggaaatcaccatt
gaaacaggaaaattagcaaagcaagccgacggttcggttgtagttcgtttgggtaacacc
atgttacttgcgacagttgtagctaataaagatattaaagaaggtcttgacttcttgcca
ttatcggttgactatcaagaaaaatttgcttctgccgggcgtattccaggcagcttccaa
cgtcgtgaaggcaggctttcggatccggaagttttgataagccgcctggtggaccgcgtt
ttgcgtccattgttcccggatgattaccacgcagaagttcaggtaaacatattgctgatg
tcggctgatgcaactgcattgcctgatgcattggcagctttggccgcttctgctgcactt
gcagcttctgatattcctttcggcggacccgtttcagaagttcgtgttgctaaaatcgat
ggccagtatgtcgttaacccaggttcagcggatctggaacgtgctacattggaattgatg
gtaggcgcgacttacgatgacatcgcgatggtggaaggtgaaatgagcgaagtttccgaa
gaagaagttgtggaagctttgaaggttgcacatgaagtcattaagaagcaatgccttgct
ttgaaagaatttgaagcggcggttggcaaaacagaaaagagagaatatgtaggcgatgca
gctgacgaggcgcttgaagcacgtttgagagcatttgcttatgacaaaatatatgcggta
acgcaattgggttctaccaacaaaacggttagaaaagacggtttcaaggcagtttgggaa
gaatttacggcttctattccggaagacgaagaaggattcgacaaaggactggcgaaacgt
tatttcaatgaccttgtatgggaggcatcacgtcgccttgttttggacgaaaggattcgt
ctggatggccgtaaactggatgaagttcgtcctatcgcttccgaagttgactttttgcca
aatgcacacggttctgctttgtttacaagaggagaaacgcagtctttgacaacggttact
ttgggtacaaaaaatgacgagcagattgttgatacgccgatgaaatacggttacagcaaa
ttcatgctgcattacaacttcccgggattttcaacaggtgaagtaaaaccaaaccgtggt
cctggccgtcgtgaggttggacatggtaacctggctttacgtgcattgaagaaagtattg
cccgtagctgaggataatccttacacaatccgtatcgtttccgacattcttgaatcaaat
ggctcgtcttctatggcaactgtttgcgcaggatcactcgcattgatggattcaggtttg
aaaatcaaagcacctgtttcaggaattgcaatgggattgatctcggatgaaaaaaccggc
aagtatgcggttctttcggacattttgggtgatgaagatcacttgggagatatggacttc
aaagtaacaggaactgaaaaagggatcacagcatgccagatggacatgaaagtgaatggt
ctttcttttgaagtgcttacagaagcgcttatgcaggcgaaagcaggcaggttgcacatt
ctgggtgaaatgaataagacgatgacagaaagccgtgctgatcttaaaccacatacacca
cgcgctatcgttatcaagattgaccgtgaaatgattggagccgtaatcgggcctggtggc
aaggttgttcaggatattcagaaagaatctggtgctacggtttctattgaagaaaaagat
ggagcaggatttgtaagtatattctctgctgacaagacttcgatggataaagcggttacg
cgtatcaaaggaatcattcttgtgcctgaaatcggagaggtttattctggtaaagtgaag
tcaattatgccatttggcgcgtttgttgagttcttgccaggaaaagacggcttgcttcac
atttccgaaattaagtgggaacgtcttgaaaaaatggacggagttcttgaagtgggagag
gaagttcaggttaaattggttgaaattgataagaagaccggtaaataccgcctatcccgt
aaagtgttgctgccgaagccagagaacaaaaatgattaa
DBGET
integrated database retrieval system
