Dyadobacter fanqingshengii: NFI81_12210
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Entry
NFI81_12210 CDS
T08895
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
dfq
Dyadobacter fanqingshengii
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
AAA_5
AAA_2
AAA
HTH_8
cREC_REC
AAA_3
AAA_16
AmiR_N
Motif
Other DBs
NCBI-ProteinID:
USJ38520
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Position
complement(2939952..2941376)
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AA seq
474 aa
AA seq
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MFTRINNMGLKVLIVEDQFIEANDLQLILKSAGHSVCGIAKSVAAALEFLQTNKPDIVLL
DIFLKGPKTGIDLAPSLTSENIPFIFISANSDPSTFDAAKATRPDGFLIKPFRKLDILVA
LDIAIYRHQYANEHALHQDQWRKNSNTLPGQTEALAEFKQIIGRSPRLLQVLDLVSQVAP
LDTSVLILGETGVGKEGIAKAIHQLSKRKNKPLIKVNCGAIPPSLIESELFGHEKGAFSG
ASDRRIGKFEQAQGGTIFLDEIGEMPLETQTKLLRVIQEKELERIGGRTTIKLDIRFITA
TNRNLYKEVAAGKFRIDLYYRINVFTITLAPLRERKEDIPSLVDYFLKKHAKLSYNQPKR
VSPQALEKLLAYSWPGNIRELENVIERHIIITPFGTISSIDLPEDETAENQKMGDVSKTK
SPAGHEKQSILAALNKSNGKVSGKGGAAEILNLPAATLASKMKKLGISWSFVSG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgttcacgagaataaataacatgggcctgaaagtattgatagtagaggaccaattcatt
gaagcaaatgaccttcagctgattttgaaaagcgccggtcattctgtttgtggcattgca
aaatccgtggcagcagcccttgagtttctgcaaacaaacaagcctgatattgttttgctg
gatatattcctgaaaggacctaagacgggtattgacctcgcaccgagcctcacttcggaa
aacatcccgttcatttttatttccgccaattcagacccatcgacattcgacgctgccaaa
gcaactcggcctgacggcttcttgatcaagccattcaggaaactggatatcctggtggca
ctggatattgccatttaccggcatcaatatgcgaatgagcatgcccttcaccaggatcaa
tggcggaaaaacagtaacactttgccgggacaaacggaagcccttgcagaatttaagcag
atcatcggccgcagtcctagattgctgcaggttctggacctggtcagtcaggtagcgcca
ttggatacctccgtgctgatcctgggggagactggggttggcaaagagggcatcgcgaag
gcgattcaccaactttcaaaaagaaaaaacaagccgctcatcaaagtcaactgcggggca
atcccgcccagcctgattgaatccgagctattcgggcatgaaaagggcgcattttccggt
gcttccgacaggcggataggaaaatttgagcaggcgcagggcgggacgatttttctggat
gaaatcggtgaaatgcctttggaaacacaaaccaaactgctccgggtaatccaggaaaaa
gaattggaacggattggtggcagaaccacgatcaagcttgatattcggttcattacggcg
acaaaccgtaatctgtacaaagaagtagcagcaggaaagtttcggatcgatctgtattac
aggatcaatgtctttacgatcacgcttgcacccttgcgcgagcggaaagaagatattcca
agtctggtcgactattttctgaaaaaacatgctaaactatcttacaaccagcccaagagg
gtgagccctcaggcgctcgaaaagctgctcgcctattcctggccgggaaatatcagggag
cttgaaaatgtcattgagcgacatatcattatcaccccattcggtacaatctcatccatc
gaccttccggaagacgaaacagctgagaatcaaaaaatgggtgatgtttcgaagaccaaa
tcccccgcagggcatgaaaaacaatccattctggcagcgctaaacaaaagcaatggaaag
gtttccggcaaagggggagcggcagagattctgaacttgcccgctgcgacactggcttca
aaaatgaaaaaattggggatcagctggagttttgtttccggataa
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