Dyadobacter fanqingshengii: NFI81_13730
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Entry
NFI81_13730 CDS
T08895
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dfq
Dyadobacter fanqingshengii
Pathway
dfq03030
DNA replication
dfq03430
Mismatch repair
dfq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NFI81_13730
03430 Mismatch repair
NFI81_13730
03440 Homologous recombination
NFI81_13730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfq03032
]
NFI81_13730
03400 DNA repair and recombination proteins [BR:
dfq03400
]
NFI81_13730
Enzymes [BR:
dfq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NFI81_13730
DNA replication proteins [BR:
dfq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NFI81_13730
DNA repair and recombination proteins [BR:
dfq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NFI81_13730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_22
RuvB_N
RCF1-5-like_lid
AAA_14
AAA_5
AAA_30
DNA_pol3_delta_C
AAA_2
Rad17
AAA_18
AAA_7
AAA_33
VapE-like_dom
AAA_19
RNA_helicase
AAA_16
Sigma54_activ_2
Mg_chelatase
nSTAND3
AAA_assoc_2
AAA_24
iSTAND
Motif
Other DBs
NCBI-ProteinID:
USJ38736
LinkDB
All DBs
Position
3296154..3297932
Genome browser
AA seq
592 aa
AA seq
DB search
MDNFVVSARKYRPVTFDSVVGQSHITTTLKNAIRTNHLAQAFLFCGPRGVGKTTCARILA
KTINCQNLGDDVEACGACESCVSFQNNASFNIHELDAASNNSVEDIRNLIDQVRYPPQTG
KYKIYIIDEVHMLSQAAFNAFLKTLEEPPGYAIFILATTEKHKILPTILSRCQIFDFNRI
QPKDIAYHLSDIAKKEGIETEKEALELIGQKADGGLRDALSMFDLNVTFSTDNRLTYEAV
LENLHILDYDYYFKITDALTSGSIARSLVLFDEILRKGFDGHLFVVGLLEHFRNLLVCKD
PQTVTLLQVSESAERKYQQQSALADMSFLLSALSIASQCDINYKSAKNQRLHVELCLMKL
ANLPHVLQLSSLTAVDETAKKKVEPELKPLNPDPATPVEAKTNGIPANGFSTNGNHTDAQ
TRATQPAQAPSKLKNTIALAPSAPNADIAVKESPQGEIENAIANAPNNAIKDALSLETLQ
THWYEFAEKRRMAGNSTTEEISLNKEFKLEGTTIEIALDNTHQLEAMANVRYELLTYLKS
RLDAPRLEINPRVDPQKVNRLPYTPAEKFNYMAEKNPYLLELKQALGLDVDF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggataatttcgttgtctcggccagaaagtatcgtcccgtcactttcgactcggtggtt
ggccagtcacatatcactacaacattaaaaaacgcaatccgcaccaatcacctggcgcag
gccttccttttttgcgggccaagaggggttggaaagaccacatgcgcacggattttggcc
aaaaccattaactgccagaaccttggcgatgatgtggaagcctgcggagcttgcgaatct
tgtgtaagctttcaaaacaatgcatcattcaacattcacgagctggatgctgcttctaat
aactccgtcgaagatatccgtaacctcatcgatcaggttcgttacccgcctcaaacgggg
aagtacaagatctatattattgatgaggttcacatgctttcgcaagcggctttcaatgca
tttttgaaaacattggaagagccgccgggttatgccatttttatcctggctacaacagaa
aagcataaaatcctgccgaccattctttcgcgttgccagatcttcgatttcaaccgcatt
cagccgaaagatatcgcttatcacctctccgatattgcgaagaaagaaggcattgaaaca
gaaaaagaagcattggaattaatcggtcaaaaggcggatggcggtcttcgggatgcgctt
tcgatgtttgaccttaatgtgactttctcaacggataacaggcttacttacgaggctgtg
ctggaaaatctgcacattctggattatgattattatttcaaaatcacagacgcgctgact
tccggcagcattgcacgttcccttgttttgtttgatgaaattttaagaaagggctttgac
ggccatctgttcgtggtcggacttttagagcatttcagaaatttgttggtttgcaaagat
ccgcaaactgtaacgcttttgcaggtttcggaatcagcggaacgaaaatatcagcagcaa
tctgcactggctgatatgagctttttattatcggcgcttagcattgcaagtcaatgtgat
atcaattataaatcggcaaaaaatcagcggttgcatgtcgagctatgtttgatgaagctt
gctaatctgccccatgttcttcaactttcctcccttaccgccgttgatgaaacggcaaaa
aaaaaagttgagcccgaattaaaacccttaaatcctgatccggcaacgcccgtagaagcc
aagactaatggaattcctgccaacggattttcaaccaatggaaatcatacggatgcccag
acgcgtgcaacccaacctgcacaggctccgtcgaagttaaaaaataccatcgcgttagcc
ccaagtgcgcctaatgcagatatagctgttaaggaatcgccacaaggagagattgaaaat
gccatagccaatgctcctaataatgccataaaggacgcattgtcattagagacattacaa
acgcattggtatgaatttgccgaaaaacggaggatggcaggcaattcaacgacggaagaa
atcagtttaaacaaagaattcaaactggaaggcacgaccattgaaattgctttggacaac
acacatcagctggaagcaatggccaatgtgcgttatgaactgctcacttatctcaaaagc
cgccttgacgcgccaagattagaaatcaatccgcgtgtagatccccaaaaagtgaaccgg
cttccttacacaccggcagagaaattcaattatatggctgagaaaaatccctatttgctg
gaattgaagcaagctttgggattggatgtagacttttaa
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