Dyadobacter fanqingshengii: NFI81_16100
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Entry
NFI81_16100 CDS
T08895
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
dfq
Dyadobacter fanqingshengii
Pathway
dfq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NFI81_16100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfq03021
]
NFI81_16100
Transcription machinery [BR:
dfq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NFI81_16100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
GerE
Sigma70_ECF
Sigma70_r2
DAXX_hist_bd
HTH_10
HTH_5
HTH_40
HTH_30
HTH_24
Motif
Other DBs
NCBI-ProteinID:
USJ34228
LinkDB
All DBs
Position
3892326..3892949
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AA seq
207 aa
AA seq
DB search
MIKWFRGYCRFLDYNFASHIKDQMKPTFTDEQLVVQLSESNKRAFEEIYDRYWYKLFCIS
FHQTGSREEAEELVHDLFESLWKRRLESKINHLSSYLVIALKYLIVNHIKSQITWRKYQE
YVLLNKMHEISTTEENIEFNDLSEAIDKAMKKLPEKTSRVFQLSRFENQSVKSIAKELHI
SEKAVEYHITKSLKVLKDNLWIYQTDN
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgataaaatggtttaggggttattgccggttccttgactataactttgcaagccatatt
aaggatcagatgaagccaacatttaccgatgaacaactggtcgttcaactctccgaaagc
aacaaacgcgcttttgaggagatctatgaccgttattggtataagttgttctgcatctca
tttcaccagaccggatccagggaagaggcggaggaattggtgcatgatttgtttgaaagt
ctctggaaaagaaggctggaaagcaagatcaatcatttgagttcttacctcgtcattgca
ttgaaatacctgattgtcaatcacatcaaatcgcagattacctggcgcaaatatcaggaa
tatgtgcttttgaataagatgcatgagatttcgacgactgaggaaaacattgaattcaat
gatctttcagaagccattgataaggcgatgaaaaaattgcctgagaaaacgagccgtgtg
tttcagctcagtcgctttgaaaatcagtcggttaagagcattgccaaagaactccacatt
tccgaaaaagccgtggaatatcacattaccaagtccctgaaagtcctgaaagacaatctt
tggatttatcagacagacaattga
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