Dyadobacter fanqingshengii: NFI81_16465
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Entry
NFI81_16465 CDS
T08895
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dfq
Dyadobacter fanqingshengii
Pathway
dfq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NFI81_16465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfq03021
]
NFI81_16465
03400 DNA repair and recombination proteins [BR:
dfq03400
]
NFI81_16465
Enzymes [BR:
dfq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NFI81_16465
Transcription machinery [BR:
dfq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NFI81_16465
DNA repair and recombination proteins [BR:
dfq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NFI81_16465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
USJ34300
LinkDB
All DBs
Position
complement(3973953..3974942)
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPDKVVMEKADDFHGLFEFKPLEKGYGVTIGNALRRILLSSLEGYAITSVKFP
GVLHEFSSIEGIVEDVTEIILNLKMVRFKKVSDLNESRIVVNLKNVSVITAGDIGKFTNA
FEVLNPDQVICHIDDQKEFEMELLLDKGRGYVPADEPRANELPFGYIAVDSIYTPIKNVK
YSVENTRVEQRTDYERLLIDIQTDGSIHPEDALKGAANILIQHFMLFSDQTMTFEKQKAE
EDNQVDEEMLRMRKLLKTSLSELDLSVRAYNCLKSADVKSLGDLVRLEISDMMKFRNFGK
KSLTELEQLVADKQLTFGMDVAKYRLDED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatattagctttccaaatgcctgataaggtcgtcatggaaaaagcagacgacttt
cacgggttgtttgagtttaagcctttagagaaaggatacggcgtaaccattggtaatgca
ttacgtagaatacttctttcatctttggaaggttatgccatcacgagcgtgaagttccct
ggtgttcttcatgaattttcttctatcgaaggtatagttgaggatgtaacagaaatcatc
ctgaaccttaaaatggttcgttttaaaaaagtttctgatctgaacgaaagcagaatcgtt
gtcaaccttaaaaatgtatccgttatcacagcgggagacattggcaagtttaccaatgca
tttgaagttttaaacccggatcaggttatatgccatattgatgaccagaaagagttcgaa
atggaacttcttttggacaaaggaagaggatatgtccctgctgatgagccacgtgcaaac
gaattgccatttggatacatcgcggtggattctatttatacgccaattaaaaacgttaaa
tacagtgttgaaaatacacgtgtagaacaacgtacagattatgagcgtcttttgatcgac
attcagacagatggttctatccatccggaagatgcgttaaaaggggctgcaaacattttg
attcaacactttatgctattctctgatcaaacaatgacgtttgagaagcagaaagcagaa
gaggataatcaagtggatgaagaaatgttacgtatgagaaaactgcttaagacttcattg
tctgagctggatctttctgtacgtgcatacaactgtttgaaatcagctgacgttaaatca
cttggtgatttggttaggctggaaatttcagacatgatgaaattccgtaattttggtaaa
aaatctcttactgagttggaacagcttgtagctgataaacaactcacatttggaatggac
gttgccaaatatcgtttggacgaagattga
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