Dyadobacter fanqingshengii: NFI81_18720
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Entry
NFI81_18720 CDS
T08895
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dfq
Dyadobacter fanqingshengii
Pathway
dfq03030
DNA replication
dfq03430
Mismatch repair
dfq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NFI81_18720 (dnaE)
03430 Mismatch repair
NFI81_18720 (dnaE)
03440 Homologous recombination
NFI81_18720 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfq03032
]
NFI81_18720 (dnaE)
03400 DNA repair and recombination proteins [BR:
dfq03400
]
NFI81_18720 (dnaE)
Enzymes [BR:
dfq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NFI81_18720 (dnaE)
DNA replication proteins [BR:
dfq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NFI81_18720 (dnaE)
DNA repair and recombination proteins [BR:
dfq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NFI81_18720 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
DNA_pol_B_exo2
Motif
Other DBs
NCBI-ProteinID:
USJ34733
LinkDB
All DBs
Position
4507598..4510603
Genome browser
AA seq
1001 aa
AA seq
DB search
MLINCHSYFSLRYGTLSTEDLTDMLAQNEYDVAVLTDINNSSGVFPFVQSCRDKGITPIV
GMEYRTGDRLLYIGIAKNEAGFGELNQLVSTANLSKAPLPDFPPSFNNAFVVYPYGTRPI
NRLRENEYIGVKPSDLPQIVMEPRSNYDRYVILWPVTVKGPKDFVLHQQLRAVDHNTIFS
KLTTEMYAKLDDVMPSRAKLINTYQMYPEIIQGTEKLLAQCSFNFDFEIVRNKKFFTGNG
HDDRILLERYTMTGLERRYGKKNKEALGRVQKELRIIDDLNFSSYFLITHDIVRYAASRD
FQYVGRGSGANSIVAYCLGITDVCPIELDLYFERFLNPKRKTPPDFDVDFSWRDRDEIFE
YIFNRYQTKHTALMGAMSTFKDRSVIRELGKVYGLPKEDIDLLIKNPGMAQNYPDVVEKI
IEAYEQLADYPNQRTIHACGVLISEDPITNYTALDLPPKGFPTAHIDMHVAEQIHFEKFD
ILSQRGLGHIKDCIQIIKDNRGEAVDISNPKKLFFDPKIQKELREANTLGCFYIESPAMR
QLLTKLRCDTYLVLVAASSVIRPGVASSGMMKAYIERHRDPAITEYLHPIMEQQLKETYG
VMVYQEDVIKIGHYFGGLDLADADVLRRMMSGKTRSAKHMAEIRDKYFNHCQQVGHPEDV
AKEVWRQMESFAGYSFSKAHSASFAVESFQSLYLKAYYPIEFMVSVVNNYGGFYDRRTYL
HEATKAGAIVHVPCVNKSFMQTTLEGIDIYLGFDYMKDLESHTVETLLSVRETQGKFISL
EDFVLRTGISIQQVKILIRAGAFSFTGKVKTNLMWEAHWVCASVERSTPPQLFGTQVTFP
KLPVFEYSLVEHLYDEIEILSVPVSGTYFDFLKTDFRGDVMAADLGKYVGKVVRMVGEYV
NYKPVKTKQGQIMMFFTFLDVNKNFFDTVHFPDSLANWTFQGAGVYLVEGTVTEEFECYS
LTVKRFAKIPIKQNPKNITTNEKELLNLRPRATQQIANDSK
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcaattgccactcctattttagccttcgatatggcacactttcaaccgaagat
ttgaccgatatgctggcccaaaacgagtatgatgtggctgttttaacggacattaacaac
tcatcgggagtgtttccatttgtccagagttgcagggataaaggcatcacgccgattgta
ggaatggagtaccggacgggcgacaggttactctatattggaatcgcaaaaaatgaagcg
ggctttggggaattgaaccaactggttagcacggcaaatttgtcgaaggcacctctcccc
gacttccctccatcgttcaataatgcatttgttgtttatccttacggcacccgtccaatt
aaccggctacgcgaaaatgagtacataggtgtaaagccaagcgatcttccacaaatcgtg
atggagccacgatcaaattacgaccgatacgtgattctgtggccagtaaccgtaaaggga
cccaaagatttcgtcttgcatcagcagcttcgcgcagtagaccataatacaattttctca
aagctaacgaccgagatgtacgccaaacttgatgatgttatgccatccagggcaaaactc
atcaatacctatcaaatgtatcctgagataattcaaggtacagaaaagctattagcccag
tgctcatttaattttgactttgagattgtcagaaataagaaattttttaccggcaacggg
catgatgatcgtatccttttggagcgttacacgatgaccgggcttgaacgcagatatggc
aaaaagaataaggaagcgttaggacgtgttcaaaaggagcttcggattattgatgacttg
aattttagttcttacttcctgatcacacatgacatcgtgcgttatgcagcatcccgtgat
tttcagtatgtagggcggggatcaggggccaatagtatcgttgcttattgcctgggaata
actgacgtctgccctattgaattggatctctattttgaacggtttctaaaccctaaacgg
aaaacacccccggacttcgatgtcgacttttcatggcgtgaccgtgatgaaatatttgaa
tatatcttcaatagataccaaactaagcataccgcgctcatgggtgctatgtccacattc
aaggacaggtcagtaatccgggagctaggcaaggtctacggcttaccgaaagaagacatt
gatttgttgataaagaaccctgggatggctcaaaactaccctgatgtggtggagaaaata
atcgaagcctatgagcagcttgcggattaccctaaccaaagaacaattcacgcctgcggt
gtgctaatatcagaggatccaatcacaaattacacagcgctggacttgccaccaaaaggt
tttccgacagcccacattgatatgcatgtggccgaacaaattcattttgaaaaatttgac
atcctcagccagcgcgggcttgggcacataaaagattgcatccaaatcatcaaggataac
cgcggggaagctgttgatatttccaatccaaaaaagctgtttttcgacccgaaaattcaa
aaagaacttagggaagcaaacactctgggctgcttctacattgagtctcctgctatgcgc
caattactgaccaagctccgatgcgacacttacctggtactggtcgctgccagctccgtt
ataaggcctggtgttgccagttctgggatgatgaaggcctatatcgaaaggcaccgtgac
cctgcaataacagaatatctccacccgatcatggagcagcagctgaaagaaacttacggt
gtgatggtttaccaggaagacgttatcaaaattgggcattacttcggcggccttgattta
gcagatgcagatgtactccgtcgaatgatgtccggcaaaacccgaagcgcaaaacatatg
gctgaaatcagagacaagtacttcaaccattgccagcaagttgggcacccggaagatgtt
gcaaaggaagtttggcggcagatggaaagttttgcaggttattctttttcgaaagcgcac
tcggccagtttcgcagtagaaagcttccaatcgctctatctcaaagcctattatccgatt
gaattcatggttagcgttgtcaacaattacggaggtttttatgacagacgaacgtatctg
catgaagcaaccaaagcaggcgcaatcgtccatgtcccatgcgtaaacaagagcttcatg
cagacaaccctcgaaggcattgacatctacctcgggttcgattacatgaaagacctcgaa
tcccatacggtagaaacacttctcagcgtaagggaaacacagggtaaattcataagtctt
gaggatttcgtgctgaggacagggatatcaattcagcaagtaaagatcttaatccgtgcc
ggggcatttagctttacgggtaaggttaaaacaaaccttatgtgggaagcgcactgggtt
tgcgcctctgtggagagatcaaccccaccgcaactgtttggcacacaagttacatttcca
aagctcccggtatttgaatattccctggttgaacatctatatgacgagattgaaattctc
tctgtgccggtatcgggcacatatttcgacttcctgaaaacggattttcgtggcgatgtg
atggcggctgacctgggcaaatatgttgggaaggtggttcgaatggtaggggaatatgtg
aattacaagcctgtaaaaactaagcaggggcagatcatgatgttcttcacctttttagat
gttaacaaaaacttttttgacacagtgcatttccctgattcgcttgctaattggacgttc
caaggtgccggagtgtacctcgttgaaggaacagtcacagaagaatttgaatgctactca
ctaaccgttaagcggtttgcaaagatacctatcaaacagaacccgaaaaatatcactacc
aatgagaaagaactactcaatctccgcccacgcgctacacagcagattgcaaatgattcg
aaataa
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