Dyadobacter fanqingshengii: NFI81_19135
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Entry
NFI81_19135 CDS
T08895
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dfq
Dyadobacter fanqingshengii
Pathway
dfq03030
DNA replication
dfq03430
Mismatch repair
dfq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NFI81_19135
03430 Mismatch repair
NFI81_19135
03440 Homologous recombination
NFI81_19135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfq03032
]
NFI81_19135
03400 DNA repair and recombination proteins [BR:
dfq03400
]
NFI81_19135
Enzymes [BR:
dfq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NFI81_19135
DNA replication proteins [BR:
dfq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NFI81_19135
DNA repair and recombination proteins [BR:
dfq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NFI81_19135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
USJ34814
LinkDB
All DBs
Position
4592767..4593576
Genome browser
AA seq
269 aa
AA seq
DB search
MHTLRLKKPLAFFDLETTGVNIVRDRIVEISVVKALPNGETEIRTRRINPEMPIPLESSL
IHGIYDEDIKDAPTFKGIAKNLATFLEGCDLAGFNSNRFDIPMLVEEFLRVGVEFDLKNR
KTVDAQRIYHMMEPRNLGAAYKFYCGKELLNAHSAEADTIATFEVLQGQIARYEGVKVVD
AHGVETEPIKNDVAALHELTASKLIDFAGRMSYNDKGEEVFNFGKHNGKRIVEVLKNEPS
FFDWIMKGEFPLDTKRKLTEIKLRALTQR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcataccctccgtctgaaaaagccgctcgctttttttgatcttgaaacaaccggagtc
aatatcgtccgcgaccgtattgttgagatatctgtcgttaaggcacttcccaacggcgaa
accgaaatccgtacccgcaggatcaatcctgaaatgccgatccctttggaaagcagcctt
atccacggcatttatgacgaggatatcaaagacgcgcccacattcaaaggcattgccaaa
aacctcgcaacatttctggaaggctgtgatctggctggctttaactccaaccggtttgac
attcctatgctcgttgaagaatttttgcgggttggtgtggaatttgatttaaaaaaccgc
aaaactgttgacgctcagcgcatttaccatatgatggagcctagaaatctgggagccgcc
tataaattttattgcggaaaagagcttttgaatgcacatagcgcggaagcggatacgatt
gccacttttgaggttttacaaggacaaatcgctcgctacgaaggcgtgaaagtcgttgat
gcacacggtgttgaaacagaacctattaaaaacgacgtggctgcattgcatgagcttaca
gcttcgaaattgatcgatttcgctggtcgaatgtcttataacgataagggtgaggaagtt
ttcaattttggaaaacacaatggaaaacgcattgtggaagtgctgaaaaacgagccttca
ttctttgactggatcatgaaaggtgagtttccattggataccaaaagaaaactgacagag
attaaattaagagcattgacccagcgctga
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