Dyadobacter fanqingshengii: NFI81_20720
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Entry
NFI81_20720 CDS
T08895
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dfq
Dyadobacter fanqingshengii
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfq03009
]
NFI81_20720 (rimO)
Enzymes [BR:
dfq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NFI81_20720 (rimO)
Ribosome biogenesis [BR:
dfq03009
]
Prokaryotic type
ribosomal protein modification factors
NFI81_20720 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
USJ35112
LinkDB
All DBs
Position
complement(4962691..4964001)
Genome browser
AA seq
436 aa
AA seq
DB search
MKTKGIVKNKVNIVTLGCSKNLVDSEVLYTQLKGNGFTVDHESKKDDSQIVVINTCGFID
NAKEESINTILRYADAKAAGMVDKVYVTGCLSHRYKDELSIEIPTVDAWFGTNELPRLLK
TLKADYKHELVGERLLTTPTHYAYLKIAEGCDRPCSFCAIPIMRGGHVSRSIEELVKEAR
SLAKRGTKELILIAQDLTYYGLDIYKKRNLSDLLAQLSDVEGIEWIRLQYAYPAGFPMDI
LDIMNERSNICKYLDMPLQTGSTEILKSMRRGITREKTEALIETIRAKVPDITLRTTLIV
GHPGETEALFDETYDFVEKMRFDRLGAFQYSHEDNTHSYTMPDDIPAEVKQERADAIMEL
QQGISYELNQQKIGNTYKVLFDRKEGGHFIGRTEFDSPEVDNEVLVPASQYVRLGDFAMV
NITSAEEFDLFGSVIS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaaggaatagttaagaataaagtcaatattgttacgctgggatgttccaaa
aacctggtagattcagaagtgctttatacacaactcaaaggaaacggattcaccgttgac
catgagtcaaaaaaggacgattcacaaattgttgtcatcaatacatgcggatttattgat
aatgcaaaggaggaatccatcaacacaatcctgcgctatgcggatgcaaaagcggcggga
atggttgacaaagtttacgttacgggctgtttatcacacagatacaaagacgaactctcc
attgaaatcccgactgtagacgcatggtttggaactaatgagctgccacgcctactcaaa
acattaaaagcagactacaagcacgaactcgttggcgaacgcctgctaacgacaccaaca
cattacgcgtatctgaaaatcgcagaaggttgtgatcgtccctgcagcttttgcgcaatc
cccattatgcgcggcggccacgtttcccgttccattgaggaattggtgaaagaagccaga
tctttggctaaacgcggcacaaaagaactgatcttgattgcacaggacctgacttactat
ggtcttgatatttataaaaaaaggaatttatctgacctgctggcgcaactttccgatgtg
gaaggcattgagtggatcaggctgcaatacgcttatccggccggatttccgatggacatt
ctggatatcatgaatgagcgcagcaatatttgcaaatatctggacatgccattgcaaacc
ggctcgaccgagattttgaaatccatgcgccgcgggatcacccgtgagaaaacagaagca
ttgatcgaaacgatccgcgcaaaagtgcctgatattacattaaggacaacattgatcgtc
ggtcacccgggagaaaccgaagcgttgtttgacgagacttacgattttgtagaaaaaatg
cgtttcgaccgtttgggggcatttcaatattctcacgaagataacacgcattcctacaca
atgccggacgacattcctgcggaggtcaaacaggagcgtgcagatgccattatggaattg
caacagggcatttcatacgaattgaatcagcaaaaaatcggcaatacatataaagttctt
ttcgacaggaaagaaggcgggcatttcatcggacggactgaattcgactcgccagaggtt
gataatgaagtgcttgtgcctgccagtcaatatgttcgcttaggtgattttgccatggtc
aacattacatctgctgaggaattcgaccttttcggttcggtaatttcctga
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