Dyadobacter fanqingshengii: NFI81_21005
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Entry
NFI81_21005 CDS
T08895
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
dfq
Dyadobacter fanqingshengii
Pathway
dfq00470
D-Amino acid metabolism
dfq00550
Peptidoglycan biosynthesis
dfq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NFI81_21005 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NFI81_21005 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dfq01011
]
NFI81_21005 (murD)
Enzymes [BR:
dfq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NFI81_21005 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
dfq01011
]
Precursor biosynthesis
Amino acid ligase
NFI81_21005 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
MurD_N
AlaDh_PNT_C
Pyr_redox_3
Pyr_redox_2
FAD_oxidored
HI0933_like
GIDA
DAO
Motif
Other DBs
NCBI-ProteinID:
USJ35167
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All DBs
Position
5020389..5021756
Genome browser
AA seq
455 aa
AA seq
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MFKSSLVQKKVVILGGGESGTGAAILAKSKGFDVFLSDRGQLNQKYIDILHRENIPFEQG
IHSESRVLESDLIIKSPGIPDTVALIVALKEKGIPVISEIEFASRYTSAKLIAITGSNGK
TTTTLLTYHLLKNAGLNVGLAGNIGDSFAWQVAEKQFDYYVLEISSFQLDNIQGFHPQIA
VLLNITPDHLDRYAYNFQNYIDSKFKIVQNQTAADHLIYFDDSEVIVAELSKRNIDSQKI
KISLANKLSEGAYLDGGKLTSNAPNGTFEQNFEELPIKGPHNAINALAAISVAQLVGVSS
EKISEGLKSFTNAPHRLEEVEVIDEVTYINDSKATNVDSVFYALGSFERPIVLIAGGVDK
GNDYSQIETLVRNKVKALIVLSKDFEKLESYFSGIVPQIYITQDVQAAVDKAQEWSVPGD
IVLLSPACASFDLFKNYEDRGEKFKAAVRNLTSQK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaagtagtcttgtgcaaaaaaaggtcgttattttgggtggaggagaaagcggc
accggagccgcaatcctggccaagtccaaaggttttgatgtgtttttgtcagatcgtggc
caattgaaccagaaatacattgacatccttcaccgtgaaaacattccatttgagcaggga
attcattcagaatcaagggttttagaaagtgacctgatcatcaaaagcccgggtattccc
gatacagtcgcgctgatcgttgcattgaaggaaaaagggattccggttatttcagagatc
gaatttgcatcccgctacacttcggccaaactgattgccataacaggcagcaacggcaaa
accaccacgacgcttcttacttatcatcttctgaaaaatgcggggctgaatgttggattg
gcagggaacattggcgacagttttgcctggcaggttgccgaaaagcaattcgactattat
gtgttggaaatcagcagttttcagttagataatattcagggttttcatccgcaaattgct
gttctgctcaacattacaccggatcacctggatcgctacgcgtataatttccagaactac
attgattcaaagttcaaaatcgttcaaaatcaaacggcagcagatcatctcatttacttt
gatgatagtgaagtgatcgtggctgagctctcgaaacgaaacattgattctcaaaaaata
aaaatatcgcttgccaataaattgtcagaaggtgcttacctggacggagggaaactgaca
tccaatgctcctaacggaacatttgagcaaaactttgaagaattgcctattaaaggcccg
cataatgcgattaatgcactggcagcaatatcggttgcgcagctggtgggagtgagttcg
gagaaaatttccgaaggattaaaatcctttaccaatgcgccacacaggcttgaagaagtg
gaagttatcgacgaagtgacatacattaacgactccaaagcaaccaatgtggattccgtt
ttttacgcgttaggcagtttcgaaaggccgatcgttttaatagctggaggggttgacaaa
ggaaatgattatagccagatcgaaacgcttgtgcgtaataaagtgaaggctttgatagtt
cttagtaaagatttcgaaaagttggaaagttacttttcaggaattgtccctcaaatatac
ataacccaggatgtccaggctgcggtcgataaggcgcaggaatggagtgttccgggtgat
attgtacttctttctcctgcctgtgcaagttttgatttattcaaaaactatgaggacagg
ggtgaaaaattcaaagctgcggtcagaaatctaaccagtcaaaaataa
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