Dyadobacter fanqingshengii: NFI81_22280
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Entry
NFI81_22280 CDS
T08895
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
dfq
Dyadobacter fanqingshengii
Pathway
dfq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NFI81_22280 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfq03400
]
NFI81_22280 (uvrA)
DNA repair and recombination proteins [BR:
dfq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NFI81_22280 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NFI81_22280 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_16
AAA_29
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_21
nSTAND3
AAA_15
Viral_helicase1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
USJ35405
LinkDB
All DBs
Position
5312965..5315847
Genome browser
AA seq
960 aa
AA seq
DB search
MNFIANENIILEHLNATELEGQDLIEVEGAREHNLKNIDVNIPRNKLVVVTGISGSGKSS
LAFDTIYAEGQRRYMESFSSYARGFIGEMERPDVDKISGLSPVISIEQKTTSRNPRSTVG
TVTEIYDFLRLLYARAGEAFSYVTGRKMVKQSQDQIINQLFTQFLGQKIILLAPAVKGRK
GHYRELFVQIARLGYNKVRVDGEVQEIAPKMQLDRYKVHDIEIVIDRVIPKKESEDPQSR
YRLSQSVATAIKQGKGALMVLDEKGETYYFSQNLMDPESGISYDDPAPNAFSFNSPYGWC
PTCQGLGMIEEITEESIMPDKSLSITKGGIAPMGEYREAWIFKQLEVLLKPFKVTLATPL
DKFPEEAMKLVLYGSEDAVPVPSKKYPGTEWETKFDGIINFLKRQQESGNDKIQDWLKDF
MTVQTCPECNGKRLRKESLHFRVDGKDIAELADSDIRVLADWLVNLEDRLEEKQRVIGHE
VLKEIRKRVGFLLDVGLDYLTLNRALRTLSGGEAQRIRLATQIGTQLTGVLYIMDEPSIG
LHQRDNVRLINSLKSLRDLGNTVLVVEHDKDMMLASDYILDIGPGAGRHGGNVVGAGTPE
VFLQNGSLTADYLSGRTAIDVPKKRRKGTGKTITLKGCTGHNLKNVNMSFPLGTMVCVTG
VSGSGKSSLIHETLFPLLNQFFYKSRREPLPYKSVEGLENIDKVIEVDQSPIGRTPRSNP
ATYTNLFTDIRTLFAELPEAKIRGYKPGRFSFNVKGGRCEDCEGAGMKKIEMDFLPDVHI
NCETCKGKRFNRETLEVRFKGKSVADILDMTVETALEFFENQPRILRKVQTLNDVGLGYI
TLGQHATTLSGGEAQRVKLSEELSKRDTGKTLYILDEPTTGLHFQDIRHLLNVLNKLVEK
GNTVLIIEHNLDVIKVADHVIDVGPEGGAQGGRIIAEGTPEKVSKVKGSYTGHFLKEELK
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgaactttatcgcaaacgaaaatatcattttggaacatttgaatgcaactgagctcgaa
ggccaggacttaattgaagttgaaggagcgcgcgagcacaatttgaaaaatattgatgtt
aatatcccgcgaaacaagcttgtggtggtcacaggcattagtggaagcgggaaatcttca
ctggcttttgacacgatttatgccgaaggacagcggcgctatatggagagtttttcttcc
tatgcacgtggttttattggtgaaatggagcggccggatgtggacaagatcagcggtttg
tcgcccgttatcagcattgaacagaaaacaacatcccgcaatccgcgttcaacggttggg
acggttactgaaatttatgactttctaaggttgctttacgcgcgagcaggcgaagcgttt
tcctatgttacgggccgtaaaatggtcaagcagtcgcaggatcagatcattaatcaatta
tttacgcagtttttagggcagaaaattatcttactagctcctgccgtaaaagggcggaaa
ggacattacagagagctttttgttcaaatcgctcgacttggctataacaaagtgcgtgtc
gatggcgaagtgcaggaaatcgcgccgaaaatgcagctagatcgttacaaagtacatgat
attgagattgttatcgatcgtgttattccaaaaaaggaatcggaagatccgcaatcgaga
tatcggttgagccaatctgttgctacggctattaagcagggaaaaggggcattgatggtt
ttggatgaaaaaggggaaacttactatttctctcaaaacctgatggatcctgaatcgggc
atcagttacgatgatccagcgcctaatgcattctctttcaactcaccttacggctggtgc
ccgacttgtcagggattgggaatgatcgaggaaatcacggaagagtctattatgccggac
aaatctttgagcattaccaagggtggcattgcgccaatgggtgaatatcgggaagcgtgg
attttcaagcaattggaggttttactaaaaccgtttaaagtcacactcgcaacgcctttg
gacaaatttcctgaggaagcgatgaaactggtgctttacggaagcgaagacgcggtgccg
gttccttccaaaaaataccccggaacggaatgggaaacgaaatttgacggcattattaac
ttcctcaaacgtcagcaggaaagcggaaatgataaaattcaggattggttaaaagatttt
atgactgtccaaacctgtcccgaatgtaatggcaagcgcctgagaaaggaatctttgcac
ttccgggtggatggtaaagacattgcagagcttgctgacagtgacattcgtgtgttggcg
gattggcttgtgaacctggaagacaggctggaagaaaagcaacgcgtaatcggtcatgaa
gtcttaaaggaaatcagaaaaagagttggtttcctgctcgacgttggattggattaccta
acattaaaccgcgcattacggacactttcgggtggcgaagcgcaacgcatcaggctcgca
acgcagatcgggacgcagcttacgggcgtgctctacattatggatgagcctagcattggc
ttgcatcagcgtgataatgtgcgtcttatcaattcgttgaaaagtctgcgcgacctggga
aacacggttttggtggtggagcacgataaggatatgatgctggcttcggattatattctg
gacattggacccggcgcaggccgtcacggtggcaatgttgtgggagccggaacacccgaa
gtttttcttcaaaatggctcattaacagccgattatttgagtggcaggactgccattgat
gttcccaaaaaacgcagaaaaggaacaggcaaaaccattacattaaaaggctgcactggg
cacaatttgaaaaatgtaaacatgtcttttccgcttgggacgatggtttgcgtgacgggt
gtgagtgggagcgggaagtcgtcgctgatccatgaaacgctgtttccattattgaatcaa
ttcttttataaatcaagaagagagccgctgccttataaatcggtagagggtctggagaac
attgataaagtcattgaggtggaccagtcaccgattggccggacaccgcgttcgaatccg
gcgacttacacgaatttatttacagacatcaggacactttttgcagagttaccagaagcg
aaaatccgtggctacaagcccggccgtttctctttcaatgtaaaaggcgggcgttgtgaa
gattgcgaaggcgcgggaatgaagaaaattgaaatggatttcctgcccgacgtacatatc
aattgcgaaacctgcaaaggcaagcgctttaaccgggaaacattagaagtgcgtttcaag
ggtaaatcggttgcagatattctggatatgaccgttgaaacagcgctcgaattttttgaa
aaccagccaaggattttgcgtaaagtgcagacattgaatgatgtaggcttgggttacatt
acattaggccagcatgctacaacactttcaggaggagaggcgcagcgagtaaaactttcg
gaagagctctcaaaacgcgatacaggaaaaacgctttacattctcgacgagccaacaact
ggtttgcatttccaggatatcaggcatttgctgaatgttttgaacaaattagttgaaaaa
ggaaatacggtgttgattatcgagcacaatctggacgtcatcaaagttgcggatcacgtt
attgacgttgggcccgaaggcggcgcgcaaggcggacgcatcattgccgaaggaacacct
gagaaggtctcgaaagtgaaaggaagttataccggacatttcttgaaggaagagcttaaa
tag
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