Dyadobacter fanqingshengii: NFI81_22425
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Entry
NFI81_22425 CDS
T08895
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dfq
Dyadobacter fanqingshengii
Pathway
dfq00061
Fatty acid biosynthesis
dfq00071
Fatty acid degradation
dfq01100
Metabolic pathways
dfq01212
Fatty acid metabolism
dfq02024
Quorum sensing
dfq04146
Peroxisome
Module
dfq_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NFI81_22425
00071 Fatty acid degradation
NFI81_22425
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NFI81_22425
09145 Cellular community - prokaryotes
02024 Quorum sensing
NFI81_22425
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dfq01004
]
NFI81_22425
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dfq04147
]
NFI81_22425
Enzymes [BR:
dfq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NFI81_22425
Lipid biosynthesis proteins [BR:
dfq01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NFI81_22425
Exosome [BR:
dfq04147
]
Exosomal proteins
Exosomal proteins of breast milk
NFI81_22425
Exosomal proteins of breast cancer cells
NFI81_22425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
USJ35431
LinkDB
All DBs
Position
complement(5348053..5349762)
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AA seq
569 aa
AA seq
DB search
MIAISKETYPWLKNYPEGIPYEINPDAYVSLVEMMEISFRENADKPAYTNMDKQLTFGQV
DELSKNFAAYLQGLGLVQGDRIAIQMPNLLQYPVAMMGALRAGLVIVNTNPLYTPREMQH
QFKDSGAKAVVILANFAVNLEKIIANTNIQHIIITEIGDLLGFPKKLIVNAVVKYVKKMV
PKYHVPEAVSFSKALSIGAGREYKRPNVSGIDIAFIQYTGGTTGVSKGAMLTHRNLIANV
EGINEWLMSKMRRSPATGQLTIVGALPLYHVFALTINGLCGIKWGALNILITNPKDLPAF
VKELKKFKFHIFPGLNTLFNGLLNNPDFSSIDFSELKITIAGGMALQKVVAERWEKITGC
PLVEGYGLSETSPVLSVNPLDDHHKSGTIGLPFPSTEMRILKDDETWAPLGEKGEICARG
PQIMLGYYNRPDETVKVIFEDEGGRWFKTGDIGYEDEDGFFKIVDRKKDMILVSGFNVYP
NEIEEVVSQCPGVLEVACVGVPDEKSGEMVKIFIVKKDPELTEEKVKAFCKENLTGYKIP
RRIEFRSELPKTNVGKILRRALREEEMAT
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctatatcaaaggaaacctatccgtggctgaaaaattatcccgaaggcattccc
tatgaaataaaccctgatgcatacgtttccctcgtcgaaatgatggaaataagtttccgt
gaaaatgcggataagcctgcttacaccaacatggataagcagcttacatttgggcaggtt
gacgaattatccaaaaattttgcagcgtatttacaaggacttggtttggttcagggcgac
cgcatcgccattcaaatgccgaatttgctgcaatatccggtggccatgatgggcgcgttg
cgtgcaggcttggtgatcgtaaataccaatcccctttatacgccgcgggaaatgcagcat
cagttcaaagattcgggagctaaagcggttgtgattctggcgaattttgcggttaatctg
gaaaaaataattgctaacacgaacattcagcacatcatcatcacggaaatcggcgatctc
ttgggtttccccaaaaagctgatcgtgaatgcagtggtaaaatatgtgaagaagatggtc
ccgaaataccatgttccggaagccgtttccttttcaaaagccctttccatcggcgccggt
cgtgaatataagagaccaaatgtttccggaattgacattgctttcattcaatatacaggt
ggcacaaccggcgtttcaaaaggcgctatgctcacccaccgcaacctgatagccaatgtg
gagggcattaatgagtggttaatgtctaaaatgaggcgctcgcctgcaacggggcagctt
actatcgtaggcgcattgccattatatcatgtttttgcattaaccattaacggattatgc
ggcatcaaatggggtgcgctgaatattctgatcacaaatccgaaagatcttccggcattt
gtaaaggaactcaagaaattcaaatttcacattttccctggcctgaacacattgttcaat
ggtctgctgaataatcccgatttcagctccattgatttttccgaactaaaaataaccatt
gcgggaggcatggccttgcaaaaagtggtggccgagcgctgggaaaaaattacaggctgc
ccgctggtggaaggttacggattatccgaaacttctccggtgctttctgtcaatccgctg
gatgatcatcacaagtcaggcacaatagggcttccgtttccgagcacagaaatgcgcatc
ctgaaagatgatgaaacctgggcgcccttgggcgaaaaaggagaaatatgtgcacgaggg
ccgcaaattatgctgggttactacaaccgcccggacgaaactgtgaaagtgatctttgaa
gatgaaggaggccggtggttcaagacaggagatatcggatatgaggatgaggacggcttt
ttcaaaatcgtggaccggaagaaggacatgatcctggtctcaggttttaatgtgtatccg
aatgagattgaagaagtggtttcacaatgtcctggtgtattggaagttgcctgtgtaggt
gtgccggatgaaaaatcaggtgagatggtaaaaatcttcattgtaaaaaaagatcccgag
ctgacggaagagaaagtgaaggcattttgcaaggaaaatctaaccggttacaagatcccg
cggcgcatagaattcagaagtgaattgcccaaaactaatgtcggcaaaattctcagaaga
gcattgcgggaagaagaaatggccacttga
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