Dyadobacter fanqingshengii: NFI81_22685
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Entry
NFI81_22685 CDS
T08895
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dfq
Dyadobacter fanqingshengii
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfq03032
]
NFI81_22685
03400 DNA repair and recombination proteins [BR:
dfq03400
]
NFI81_22685
Enzymes [BR:
dfq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NFI81_22685
DNA replication proteins [BR:
dfq03032
]
Prokaryotic type
DNA Topoisomerases
NFI81_22685
DNA repair and recombination proteins [BR:
dfq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NFI81_22685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF1314
Motif
Other DBs
NCBI-ProteinID:
USJ35482
LinkDB
All DBs
Position
complement(5421223..5422323)
Genome browser
AA seq
366 aa
AA seq
DB search
MSVAVAVGTLTEAPVITAKQFKKLRKDPALTAAAAGLNYIQSGNAPGFLRKGKAPRFYYL
DTLGIRVKDKAQIKRIKSLVLPPAWREVWISEDPDTHLQATGIDEAGRKQYRYHPHWNLI
RNQTKYYRLLTFSDALPQLREQVEHDLRKHSFDLDKSIALVIKIMDKTCIRVGNQRYKLK
HGSSGITTLDARCASVKGNTIRFMFTGKKGIKQDITLRDTQLARLVKQYKEMPGKRLFQY
TQENGSRCSLNAHQVNDYIRKYTGSNFSAKDFRTWMGTVTAFEYLSHQEKYETQRQLTRT
LNTCLDVVAAHLGNTRTVCKKYYVHPAVFRAYENGKIQRFLNKQVEEIKLFTDSEQHVKS
LLAHQV
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtagccgtagcagttggaacgttgacagaagcgcccgtcatcactgccaaacaa
tttaaaaaattaagaaaggaccctgcacttacagccgctgctgcgggtcttaattacatc
caatccggtaatgcccctggttttctcaggaaaggcaaagcgccgcgattttattacctt
gatacactagggatcagggtaaaagacaaagctcagatcaaaaggatcaagagcctggtg
ctgccccctgcctggcgggaagtatggatcagcgaggacccggacacgcatcttcaagcg
accggaatcgacgaagcgggcagaaagcaatatcgctatcacccgcattggaacctgatc
cgcaaccagacaaaatattatcgccttctgacattctcggacgcccttccacagcttagg
gagcaggtggagcatgatttgcgcaagcatagttttgatcttgacaaatccattgctctg
gtcatcaagattatggacaaaacctgtatacgggtgggaaatcagcgttataaattaaag
catggctcctcaggaatcaccacgctggacgcgcgttgcgccagtgtgaaaggcaacaca
atccgatttatgtttacgggaaaaaaaggcatcaaacaggacattacattaagggacacg
cagttggccagattggtaaagcaatacaaggaaatgccaggaaagcggctgttccaatac
acgcaggaaaatggatcccgatgttcgctgaatgcgcatcaagtaaatgattatatccga
aaatataccggatccaatttctccgcaaaggattttcggacctggatgggcaccgtaact
gcattcgaatatctgagccatcaggaaaaatatgagacgcagcggcagttgacacggaca
ttgaatacgtgtttagacgtggtggcggcacatttgggaaatacccggactgtttgtaaa
aaatattatgtgcatcccgcggttttccgtgcttatgaaaacggaaagatccagcggttc
ctcaataaacaggtggaagagatcaaacttttcacagacagcgagcaacacgtaaagtct
ttactcgcacatcaggtctag
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