Dyadobacter fanqingshengii: NFI81_24525
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Entry
NFI81_24525 CDS
T08895
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
dfq
Dyadobacter fanqingshengii
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dfq03036
]
NFI81_24525 (xerD)
Chromosome and associated proteins [BR:
dfq03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
NFI81_24525 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
DUF3435
Motif
Other DBs
NCBI-ProteinID:
USJ35841
LinkDB
All DBs
Position
complement(5840321..5841217)
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AA seq
298 aa
AA seq
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MWQSYIKHFKNYLRLERSLSGNSVEAYVRDVEKLEEYLELAKIELPPAKINEEHLSAFLK
YLSELGLAAHSQARMLSGIKAFFKYLLLENEITEDPTELLESPRLPRKLPDVLSYEEIET
MLSAIDHSTPEGTRNRAIIEVLYSSGLRVSELTGLQLTHCYFDIGFLRILGKGDKVRLVP
IGKEAIKYTQIYLDHVRNEIAPAKDAEDIVFLNRRGGQLSRVMIFIMIKDIVEKAGIHKN
VSPHTFRHSFATHLIEGGASLRAVQEMLGHESITTTEIYTHLDRDYLRQVITEFHPRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaaagctacatcaaacattttaaaaattatcttcgcctggaacgctccttatcg
ggcaattcggtggaagcttatgtaagggatgttgaaaaactggaagaatatttagaactg
gcaaaaatcgaattgccgcctgcgaagattaatgaggaacatttatcagcatttctaaaa
tatttgtctgagcttggcctcgctgcacattcccaggcgcgcatgctttcgggcataaag
gccttttttaaatatcttttgcttgaaaacgagattacagaggaccctaccgaacttttg
gaatcccctcgcttgccaagaaaactgcccgacgtgctttcctacgaagaaatcgaaacg
atgctttccgctatcgaccattccacgccggagggaacgcggaatcgggcaattattgaa
gtgctgtacagttcaggcttacgcgtttcggaattgacgggcttgcagctcacacactgc
tatttcgacattgggtttctgcggatcctgggaaagggagataaggtaagacttgtccca
atcggcaaagaagcgatcaaatacacgcaaatttatctggatcacgtacgaaatgaaatt
gcccctgctaaggatgctgaggacattgtttttctcaaccgaagaggtggccagctgtcg
cgcgtgatgatttttataatgattaaagatattgtggagaaagccgggattcataaaaat
gtgagcccgcacactttccggcattcctttgcaacgcatttaattgaaggcggcgccagc
ttgcgcgcagtgcaggaaatgctagggcatgagtcgattacaaccacggaaatctacacg
cacttggatcgcgattatcttcgtcaggttattaccgaattccacccgcggggttga
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