Dermatophagoides farinae (American house dust mite): 124490192
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Entry
124490192 CDS
T08043
Name
(RefSeq) exosome component 10-like
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124490192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfr03019
]
124490192
Messenger RNA biogenesis [BR:
dfr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
124490192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Nup49_C
Motif
Other DBs
NCBI-GeneID:
124490192
NCBI-ProteinID:
XP_046908607
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MTTSSSVSDTTATDSFTTADFNDKIKETILLAREIMQNSNAKKNEKIQDLIKIQCCNTLK
ILTKLNQNDLNPNSRDCNFTRTKFDDQQKIAKLIEIDDALIDKTIHYFECAENLKEKKNS
VSNLIQVQMNVNQKQNNSRIFIKDFSKNNNGPLLGVNIKRKHSDNNNTGHLESKRNFMFM
AASNVKRPQIAYKIKVDNAYSTPFIPKLRRKPNAIVSLEESMKPLPQNEPPANLLSGYNY
PKHSYQHPYQYEIENFTISSSFFTKHDSNQFKPPPSIQEKPYKFINKRDELCELVRELKN
FKEIAIDLEHHSFRSYQGLTCLLQISTDQTDYIIDVFPLWQDMQLLNEIFTLPSILKVFH
SSTYDIIWLQRDLGIYVVNMFDTWVAAKTLGYQHLSLSSLVEQFCQFQMDKRFQLADWRM
RPIPDEMLQYARCDTHFLLYIYRKLKQELLNTSDQTGNLLRVVMERSQQMCLKRYEKKLP
EINDHVHLVWKNNLRFNQRQMAALKSLYAWRDVIARQEDESTGYVLPNNLLLKICEILPR
EQQGILACCNPIPPLVRQYINEIHMIIFDARSKVLIDQHSSTTVISQEKTDITIDLTNDL
LIDHHSSNPNKMAIDHPDHHDHLSHEHDHVLDDQQPLLRWSKEFGKFISHKQFADNDDPM
NGSHTSTSSSSNEIQSITKDMNQHSLIDMFDNDSIDCSKKYQSSTNDKKNQKEKRLPKSK
IDVEMEKLFDGYITFYQRYLIKLKQKDEQSQSSSSSQ
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttcatcatcagtttcggatacaacggcaaccgattcttttacaacagctgat
tttaatgataaaattaaagaaactattctattagcacgggaaattatgcaaaattcaaat
gctaaaaagaatgaaaaaatccaagatttaataaaaattcaatgttgtaatacattgaaa
attctaactaaattgaatcaaaatgatctcaatccaaatagccgtgattgtaattttacg
cgaacgaagtttgatgatcaacaaaaaattgctaaattaattgaaatcgatgatgccctt
atcgacaaaacgatacattattttgaatgtgcagaaaatttgaaggaaaagaaaaattcc
gtatctaatttgatacaagttcagatgaatgtcaatcaaaaacaaaataattctaggata
ttcatcaaagattttagcaaaaataataatggcccacttttaggcgttaacatcaaacga
aaacattctgataataacaataccggccatttagaatctaagagaaattttatgtttatg
gctgcatcaaatgttaaacgtcctcagattgcatacaaaatcaaagtagataatgcatat
tcaacacctttcataccaaagcttaggcgaaaacctaatgcaattgtttcgttggaagaa
tctatgaaaccgctaccgcagaatgaaccaccagcaaatcttttaagtggatataattat
cctaaacattcttatcaacacccgtatcaatatgaaattgaaaattttacaatatcatca
agcttttttactaaacacgattcaaaccaattcaagccgccaccatcgatacaagaaaaa
ccatataaatttatcaataaacgtgatgaactctgtgaattggttcgtgaacttaaaaat
ttcaaagaaattgccatagatcttgaacatcattcattcagatcttatcagggattgaca
tgtttgttacaaatatcgaccgatcaaactgattatattatcgatgtatttccactttgg
caggatatgcaattattgaatgaaatattcacattaccttcgatactgaaagtttttcat
tcatcaacatatgatattatttggctacaacgtgatcttggtatttatgttgtaaatatg
ttcgatacatgggttgctgccaaaactctcggatatcaacatctatcattatcgtcatta
gtggaacaattttgtcaatttcaaatggataaacgttttcaattggctgattggcgaatg
cgtccaatacccgatgaaatgcttcaatatgctcgttgtgatacacattttcttttgtat
atttatcgaaaattaaaacaagaattgctcaacactagtgatcaaaccggcaatctttta
cgtgttgttatggaacgtagtcaacaaatgtgccttaagcgatatgaaaaaaaacttcca
gaaatcaatgatcatgttcatttagtttggaaaaataatctaagattcaatcaacgacaa
atggctgccctgaaatcattatatgcttggcgtgatgtcatcgcacgtcaagaagatgag
agcacaggctatgttttaccaaataatcttttgttgaaaatttgtgaaatcttacctaga
gaacagcaaggaatattggcctgttgtaatcctataccaccattggtccgtcaatatatc
aatgaaatacatatgataatattcgatgcacgatcaaaagttttaattgatcaacattct
tcaacgacggttatatcacaagagaaaactgatattactatcgatttaaccaatgatcta
ttgattgatcatcattcatcaaatcccaacaaaatggctattgatcatcctgatcatcat
gatcatttgtctcatgaacatgatcatgttcttgatgatcaacaaccattgttacgatgg
tcgaaagaatttggaaaatttatatctcacaaacaatttgccgacaatgatgatccaatg
aatggaagtcatacttcaacatcatcatcatctaatgaaatccaatcgatcactaaggat
atgaatcaacattcattgattgatatgtttgataatgatagtattgattgttcgaaaaaa
tatcaatcctccactaacgataagaaaaatcaaaaagaaaaaagattgccgaaatctaaa
attgatgttgaaatggaaaaactttttgatggttatataacattttatcaaaggtattta
atcaaattgaaacaaaaagatgaacaatcacaatcatcatcgtcatcacagtga
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