Dermatophagoides farinae (American house dust mite): 124490418
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Entry
124490418 CDS
T08043
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124490418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfr03019
]
124490418
Messenger RNA biogenesis [BR:
dfr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124490418
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
124490418
NCBI-ProteinID:
XP_046908864
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MNTDNLVVDSSSTEDEDDGDDRIVDEDMKENVVNESNNTDVDDEMAHIHSHLHGGDNEDD
QFNGLILDQMQPGDDNDDDDDDDVDGQMTMENKENGTFDGNNNVDDDDHDDDLESDDETD
EEEDNVQITIGEIDFKTPLTQSSGYLNLNLQKGGRQNSTATVAKNISKTALDMDAVGTYN
GMQIYDVNLDSIEDKPWRKPGSDITDYFNYGFTEETWKVYCDRQRKIRAMNQNGQFDVNA
ALNMTQHLPTYLMANNQTINGLATINSKSMMMNDQREPLIKSIPNNNNNNNTNNNNNQSN
DQQFIDNSKFSNSIMTINSQQGMKKSSLCMPPPPLPSTNLATASSLRKHTIEVLGANNAT
TNSTQIGQGPPQLPIVPPPPPLPGSASGLLGSRPSPTSPSSSQPNQDRLEPNSISVIGNR
SNIPFPPPPLPPFAFPPVDPHVFPPSLRPPVPVPPPLGMLPPLGPNVQPPPFGSADFRPY
PPPPGSGILPHPSDQRTSSYDQDYDERSHKRSRSDYDDYDVRSSRSSDRYGRSGSGGGQN
DRDYDDRPSGGDRFQSSSTSSSSSRNHQSTSNYSSSREWDHYSDRDRERDRERERDRDRD
RDRERERDLDRNERRKERSRERSRDRSSNQHESSSSTSSASHRHNRSNRDRDLPTASTTT
TNINTSSSSSSRRDKDKDHKDRDRSDRNDHKESSSSSKNRSSKHESDHKSSSSSSHHRSS
SSTQSHSHSSSSKQKSKSSSSRSKDSKKDSDK
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgataatcttgttgtggattcatcatcgactgaagatgaagatgatggtgat
gatcgaatcgttgatgaagatatgaaagaaaatgtcgtaaacgaatcgaataatacagat
gttgacgatgaaatggctcatatacatagtcatctacatggtggtgataatgaagatgat
caattcaatggtttaattcttgatcaaatgcaaccaggtgatgataatgatgatgatgat
gatgatgatgtggatggtcaaatgacaatggaaaacaaagagaacggtacgtttgatggt
aacaacaatgtagatgatgatgatcacgatgatgatctagaatcggatgatgaaacagat
gaagaagaagataatgttcaaataactattggtgaaattgatttcaaaacaccgttgaca
caatcatctggatatttgaatctaaatcttcagaaaggcggccgtcagaattctacggca
acagtggccaaaaatatatcgaaaacagcattagatatggatgctgtcggtacttataat
ggaatgcaaatctatgatgtaaatcttgattcaatcgaagataagccatggcgtaaacct
ggttcggatattaccgattattttaattatggtttcactgaagaaacatggaaagtttat
tgtgatcgacaacgaaaaattcgtgccatgaatcaaaatggccaattcgatgttaatgct
gcgctcaatatgacacaacatttacctacttatttaatggccaataatcaaacgataaat
ggtttggcaacaatcaattcgaaatctatgatgatgaatgatcaacgtgaaccattaatt
aaatcaataccaaacaacaacaacaacaacaacactaataataataataatcaatcgaat
gatcaacaattcattgataattctaaattttcaaattcaattatgacaattaattcacag
caaggaatgaaaaaatcatctctttgtatgccaccgcctccattaccatcgacgaattta
gcaacagccagttctttacgtaaacatacaatcgaggttcttggtgcaaataatgccacc
actaatagcacccaaatcggtcaaggtccaccacaattaccgattgtcccaccaccacct
ccattaccaggatctgcttccggactattaggttcaagaccttcgcctacttcgccatca
tcatcacaaccgaatcaggatcgtcttgagccaaattcgatatcagtaattggaaatcga
tcaaacattccgtttcctccgcctcctttacccccgtttgcatttccacctgtcgatcct
catgtatttccaccttcattgcgtccacctgtaccagtaccaccaccacttggaatgtta
ccaccattaggtccgaatgtacaaccaccaccatttggtagtgcagattttcgtccttac
ccaccgccacctggttcgggaattctaccacatccatcagatcaacgaacatcatcatat
gatcaggattatgatgaacgtagccataaacgttcacgatctgattatgatgattatgac
gtacgatcatctcgatcatccgatcgatatggtcgaagtggtagtggtggtggacaaaat
gatcgagattatgatgatagaccaagtggtggtgatcgttttcaatcatcatcaacatca
tcgtcatcatcacgtaaccatcaatcgacatccaattattcatcgtcaagagaatgggat
cactattctgatcgagatcgtgaacgagatcgggaaagggaaagagaccgggatcgagat
cgagatagagaacgagaacgagatttagatcgtaatgaacgacgaaaagaacgaagccgt
gaacgatcacgtgatcgtagtagtaaccaacatgaatcaagttcatcaacatcatcagca
tcacatcgtcataatcgaagtaatcgagatcgtgatttacctacggcttctactactacc
accaatatcaatacatcatcatcgtcatcaagtcgtagagataaagataaagatcataaa
gatcgcgatcgttcagatagaaatgatcataaagaatcatcatcgtcatcgaaaaatcga
tcatcaaaacatgaatctgatcataaatcatcatcatcatcatcacatcatcgttcatca
tcatcaacacaatcgcattcacattcatcgtcaagtaaacaaaaatcaaaatcatcatca
tcgcgtagtaaagattcgaaaaaagattctgataaatga
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