Dermatophagoides farinae (American house dust mite): 124490562
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Entry
124490562 CDS
T08043
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfr03021
]
124490562
03036 Chromosome and associated proteins [BR:
dfr03036
]
124490562
Transcription machinery [BR:
dfr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
124490562
Chromosome and associated proteins [BR:
dfr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
124490562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
Tex_central_region
SH2
S1
Spt6_S1
HHH_9
Tex_YqgF
Tex_N
S1_RRP5
HHH_3
Motif
Other DBs
NCBI-GeneID:
124490562
NCBI-ProteinID:
XP_046909042
LinkDB
All DBs
Position
Unknown
AA seq
1852 aa
AA seq
DB search
MADFFDREAVSSEGSEDEEVREDIRRHKKLKTHKKTRVGSDEDSEEEEEDDDEIIAREMK
DLINDDVEEEEDDDDVDSEDDIGRGHKRSHDDDDLEEDLEDDDYDLLEENLGRRIERKKK
FRRVRRLEDDDEDDEEDRGDTLNAREAIANELFDDDDGFGNADQQQLNRAQNRGIREPSD
DQFAPIDSEHSESDEDNFIVDDNDQPIVAKQRSKRGVGYNDQALQQAQDIFGVDFDFDVF
DDNAEFDEEEMEEDYDEEGLEDRARETGKKKRQRLPKKSIFDLYEPAELERSHLTEADNE
IRNTDAPERFQTRSFPVTAAELNEIRDESEWIYRNLYEMPTITKQDKSHGIRQPLAGAKP
RSTINVISQVLKYIRNEKLSIPFLAYYRKEYYAPDLSINDLWLIFNWDEKWCQLNERKRN
LLKLLENMKDYQLSLMMKNTEDDQPLPDDFRRITDKDLQRAKSIQSFEEFNDCYIQFQLY
YSHELTDMKKFLLQQKRSARERKRLQRAQERQQQQQQQQQQRNTENGESVNNETNDMNNA
TTEELSDEDEKVEELMLAERMTFMRLSMKKDSYSFCRDSGAGRMASRFGLTPEQFGEHIS
EGYHKHEIEQHPVDPLEAAQEHISKRFDTADKVLQAATFMVGKQLSCDPLVRKTVRQMFY
ERATITVRPTKKGKKEIDESHSCYALKYLRNKPISSFAGDQFLQLYAAKNDGLVDMIITL
DDNTQKHSSSMSTASTSMMANDLATNKQAFSQYLEEIKYLYQRDEFSKNVQDWNDQRSKA
LDIALNRFLYPFLLKELTTKILSEAQHTIIQHCGDKLASYLAIGPYVPAFIQEDKDHDES
YDNDFDTRNGIRIMGFAHVPNNEEASFCALIDGDGEVTDYIKLEHFMLKRVEGGSFSYKD
REKLQNFIVSKKPHVIALGTDTIVTKDIMDDLIQMIRHLHDTKHFPLIPIEYVDSELSIV
YMNTKRANADFPTYPLKLRQAISLARRLQDPLLEFAQLCSADEEILCLKLHPLQDSVPRE
TLLNALFAEFVNRVNEVGVDINKCIIHPYTSSLIQFIGGLGPRKGAYLLRTLKKQQTQLL
ENRSQLIQNCNIGKIVFINCAGFIKIDTNAFADSGTDTYIEVLDSTRVHPEAYEWARKMA
VDALDYDEDNDHNPAQALEEIIENPEKLRDLDLDEFAKELHRQQFGLKKQTLYDIRTELT
DRYQDKRKPYRPPNDEEIFQLLTGENLTTFHTGRLVQVRVAGIVRRKPKTEQVDQAQPIR
METGLWKCPFCLKDDFNELGEVWNHFDTNQCPGQAFGVRARLDNGLTGIIPLKFLSDKEV
SDPQTRVKMGMTINCRILKVIIERFSLELTCRTSDLIDANNRFKPAKDNYYDFDSEDRDI
RSEEDSKKRKNRQRTFMKRIIVHPSFHNIDFKKSEQILAESPQGEAVIRPSSKGNDHLTL
SWKVHDGIHQNISIREEGKTNAFSLGRQLFIDNESFEDLDEIIARYVQPMAGFARDLINF
KYFRDLNGDRHAAEKVLNEEKQKAPSRIPYIVSASKEFPGKFLLSYQPNQKAFHEFITAT
PDGFKYRNNMFKSINTLFKWFKDHYKDHSTFTRTPGPQTPIINASPYISQRTPQATTSPY
VSGSNISSSNKPGFVPTPNINPQAIQRAAQSMPNHLFNTLSQVTGQTSSFNGNFAPTSNV
QLAASGNFNVTQRNNVFPATAAAGGSLPYSAGQTNMMPPPPPLPPVPNTIPVQNNRPGSR
GGNQWSDLLKQPSTTDWHSNRNNHHHNNRTMPPPLQPPLLPSSSSTSLQQSSMMISPSSN
NIIPLMNKPRTPGYSTPGASSQMSISPMQEDTTATPNIIKGGDQTPLVDEWN
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atggccgattttttcgatcgtgaagccgtatcatctgaaggtagtgaagatgaagaggta
cgtgaagatattcgtcgtcataaaaaactaaaaacccataaaaaaacaagagttggttcg
gatgaagattcagaagaagaagaagaagatgatgatgaaataatcgcacgggaaatgaaa
gatttgatcaatgatgatgtcgaagaagaagaagatgatgatgatgttgattccgaagat
gatattggtcgtggtcataaacgttcacatgatgatgatgatctggaagaggatttagaa
gatgatgattatgatttgcttgaagaaaatcttggtcgtcgaattgaacgaaagaaaaaa
tttcgtcgtgtacgtcgacttgaagatgacgatgaagatgatgaagaggatcgtggtgat
acattgaatgcacgtgaagctatagccaatgaattattcgatgatgatgatggtttcggc
aacgcagatcaacaacaattgaatcgtgcacaaaatcgaggcattcgtgaaccgagtgat
gatcaatttgctcccatagattccgaacattcagaatcggatgaagataattttattgtc
gatgataatgatcagccgattgtggcgaagcaacgatccaaacgtggcgttggttacaat
gatcaagcattgcaacaagcacaggatatattcggagtcgattttgatttcgatgtattt
gatgataatgccgaattcgatgaagaagaaatggaagaagattatgatgaagaaggtctt
gaagatcgtgctcgcgaaacgggtaaaaagaaacgacaaagattgcccaaaaaaagtata
ttcgatctctatgaaccggctgaattagaacgtagccatcttactgaagctgataatgaa
atacgtaatacagatgctccagaacgttttcagacacgatcattcccagttacagcagcc
gaattgaatgaaattcgtgatgaatctgaatggatatataggaatctttatgaaatgcca
acgataacgaaacaggataaaagtcatggtatacgacaaccattggctggtgcaaaacca
cgatcaacaatcaatgtcatatcacaagtattgaaatatattcgaaatgaaaaattgagc
ataccgtttttagcctattatcgtaaagaatattatgcaccagatttatccatcaatgat
ttatggctcatattcaattgggatgaaaaatggtgtcaattgaatgaaagaaaaagaaat
ctattgaaattattggaaaatatgaaagattatcaattatcattgatgatgaaaaatact
gaagacgatcaaccattaccggatgattttcgtcgcataaccgataaagatttgcaacgt
gcaaaatcaatacaatcatttgaagaatttaatgattgttatatccaatttcaattgtat
tatagtcatgaattaactgatatgaaaaagtttttattacaacaaaaacgttcagcacgt
gaacgtaaacgtttacaacgggcccaagaacgtcaacaacagcaacaacaacaacaacaa
caacgtaatacagaaaatggtgaaagtgtgaataatgaaactaatgacatgaataatgca
accactgaagaattgagtgatgaagatgaaaaagtggaagaattgatgcttgctgaacgt
atgacttttatgcgtttatcaatgaaaaaagattcgtattcattttgtcgtgattccggt
gctggacgaatggcatccagattcggcctaacaccagaacaatttggtgaacatatatcc
gaaggttatcataaacatgaaatcgaacaacatccagtggatccattagaagcagcacaa
gaacatattagcaaacgttttgatacggccgataaagttttacaagcagccacatttatg
gtcggcaaacaattgtcctgtgatccattagttcgtaaaactgtacggcaaatgttttat
gaacgtgctacaatcacagtgagaccgacgaaaaaaggaaaaaaagaaattgacgaatca
cattcatgttatgcattgaaatatctacgaaataagccaatttcaagttttgctggtgat
caatttcttcaattatatgccgctaaaaatgatggtcttgtcgacatgatcatcacgttg
gatgataatacgcaaaaacattcatcatcaatgtccactgcatcaaccagtatgatggcg
aatgatttggcaacgaataaacaagcattttcacagtatttagaagagattaaatatctt
tatcaaagggatgaattcagtaaaaatgtacaagattggaatgatcaacgttcgaaagca
ttggatatagctttgaatcgttttttatatccatttttactcaaagaattaacaacgaaa
attttgtctgaagcacaacatacaatcatacagcattgtggcgataaattagcatcatat
cttgccattggtccatatgttccagctttcatacaggaagataaggatcatgatgaaagt
tatgataatgatttcgatacacgtaacggtatccgaataatgggttttgcacacgtgcca
aacaatgaagaagctagcttttgtgcattgattgatggtgatggtgaagtcactgattac
ataaaacttgaacattttatgctaaaacgtgtcgaaggtggttcctttagttacaaggat
cgtgaaaaacttcaaaattttattgtatcgaaaaaaccacatgtaatcgcattgggcacc
gatacgattgtcacaaaagatattatggatgatcttattcaaatgattcgccatctgcat
gatactaaacattttccactcatacccatcgaatatgttgattctgaattatccatagtt
tatatgaatactaaacgtgcgaacgctgattttcctacttatccattgaaactacggcaa
gccatttcattagcacgacgattacaagacccattactggaatttgctcaattatgttcg
gctgatgaagaaattctttgcttgaagttacatccacttcaggatagtgtaccacgtgaa
acattactcaatgcactttttgcagaatttgtaaatcgtgtcaacgaagtcggtgttgat
attaacaaatgtataatacatccttatacatcatcattgatacagtttatcggtggtctt
ggtccacgtaaaggtgcatatctactacgaacattgaaaaaacagcaaacacaattgctg
gagaatcgatctcaactcatacagaactgtaacattggtaaaattgttttcatcaattgt
gccggtttcatcaaaatcgatacaaatgcatttgccgattcgggtaccgatacttatatt
gaagttttggatagtacacgtgttcatccagaagcatatgaatgggctagaaaaatggcc
gtcgatgcactagattatgacgaagataatgatcataatcctgcacaagcattggaagag
attattgaaaatccggaaaaacttcgtgatttggatctggatgaattcgccaaagaactt
catcgacaacaatttggtcttaaaaaacaaacattgtatgacattcgaacggaattaact
gatcgttaccaggataaacggaaaccgtatcgaccaccaaatgatgaggaaatatttcaa
cttttgactggagaaaatctcactacattccatactggacgattagtgcaagttcgtgtt
gcaggaattgtacgacgaaaacctaaaactgaacaggttgatcaagcacagccaattcgt
atggaaaccggactttggaaatgtccattctgtctaaaagacgattttaatgaattgggt
gaagtatggaatcattttgatacgaatcaatgtcctggacaagcatttggtgttcgtgca
cgactagacaatggccttaccggtattataccgttgaaatttctttcggataaagaggta
tcggatccacaaacaagagttaaaatgggcatgacaatcaattgtcgaatattgaaagtg
ataatcgaaaggttttcactcgaattaacttgccgtacatctgatttgattgatgcaaat
aatcgatttaaaccagccaaagataattactatgattttgattctgaagatcgtgatata
cgatcagaagaggatagtaaaaaacgtaaaaatcgacagagaacatttatgaaacgaatc
attgtacatccatcgtttcataatattgatttcaaaaaatccgaacaaatactggccgaa
tcaccacaaggtgaagctgtcatacgaccatcatcgaaaggcaatgatcatttaacattg
tcatggaaagtacatgatggtatacatcagaatatttccatccgtgaagaaggaaaaact
aatgccttttcattgggacgacaactattcattgataatgaatcattcgaagatttagat
gaaatcattgcccgttatgtacaaccgatggctggttttgcacgtgatttgataaatttt
aaatactttcgtgatcttaatggtgatcgtcatgcagctgaaaaagtgttgaatgaagaa
aaacaaaaggcgccatcacgtataccgtatattgtatctgcatcaaaagaatttcctgga
aaatttctattatcttatcaaccgaatcaaaaagctttccatgaatttataacggctaca
ccggatggatttaagtatcgtaataatatgtttaaatcgataaatacattgtttaaatgg
tttaaagatcattataaagatcattcaacatttactcggacacctggaccacaaacacca
attattaatgctagtccatatatttcacaacgtacaccacaagctacaacatcaccatat
gttagcggtagtaatatatcatcatcgaataaaccgggatttgttccaacacccaatatc
aatccacaagctatacaacgggcagcccaatcaatgcccaatcatctgtttaatacacta
tcacaagtgacgggacaaacatcatcatttaatggaaattttgcacccacatcgaatgtt
caattagcggccagtggtaatttcaatgtaacgcaaagaaataatgtatttcctgctaca
gcagccgctggtggtagtcttccttattccgccggccaaactaacatgatgccaccacca
ccaccacttccaccagtacctaatacaataccggtacaaaataatcgtccaggttcacgt
ggtggtaatcaatggtctgatcttctgaaacaaccatcaacaacggattggcattcgaat
cgtaataatcatcatcataataatcgaacaatgccaccgccactacaaccaccactatta
ccatcatcatcatcaacgtcattacaacaatcatcaatgatgatttcaccatcatcaaac
aatataataccattgatgaataaaccacgaacaccgggctattcaacaccaggtgcatca
tcacagatgtccattagtccaatgcaagaagatacgactgcaacaccaaatataatcaaa
ggtggtgatcaaacaccattagtagatgaatggaattga
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integrated database retrieval system
