Dermatophagoides farinae (American house dust mite): 124490844
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Entry
124490844 CDS
T08043
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr04140
Autophagy - animal
dfr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124490844
04148 Efferocytosis
124490844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dfr04131
]
124490844
Membrane trafficking [BR:
dfr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124490844
Hops complex
124490844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
CYAA_C
zf_RING_Vps8
zf-RING_UBOX
zf-RING_16
CENP-T_C
DUF2721
zf-RING_2
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
124490844
NCBI-ProteinID:
XP_046909363
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MASILEQYDAYNYQSGPIRGGTITQNEGIINLRSDQLEPIFTKNKIDFRPNYPITNMVIS
NNQLLLSMENFHLLKIDLMNPTKPTEIDLNPYFVPIKAPNRPVICGLFIDNSGQHCLITV
GQRIKNNPSMDVIPFENFYYYRKLSLLNKMKGHIITAVGWLDQPQHQQSGQCGNLLIGTN
EGKIFETHLQSDDRFLASRELSFWKLICDFSPTIASTAANLDYSSSNLSNSSMDPNKTSS
SSSSSVATANTIAVKQEPICAIKLFRLKNREFCILIATRNLIYQYIGRISPSTTTQLIGG
INSGTFADMSTGVGNGQLIDGQPYLYQIIQGPNSQKTFKEMPGYIPATRLDLFRPTISTN
MDNNYPLSFGWLTEPGIFYGDIPSDFGYKERKIFDNATVIMYSDLNQPLSDSEHSRESSN
HLHHHRSIPQSLVLTRFHLMLLYPHKLRVYCVLNRQLVWEDRFVGEPGENLVKDPIRNTI
WSYTKSSVYRYRINQEDRNIWEIYLKKKDFEQAKHFARNDLIKMDRIICEEALYHFAHKN
YMKSAQLFTQTRTKSFEEITLKFIELRDENQEALKEFLLNKLTTLSSEKERTQIIILLLW
LFELMLNQLALLKSSAQDYSITNDNQSDDHDHEKLKCEQDKIEQCLKRIISNANYRQPLR
NNRKIFYDLILNHDNQEMYEFFANEINDFDCLLDHYCRVRNYRQAINLMRREECLDYYYH
YSPLIIQHLPKELIDCLIPLASELDMAKLIPSLVHFDHSNDDDHSVNDERREHQCKEILR
FLEFCVYDLKIRDGLVHNYFLALMVQYEPDKLLSYLNDVSQQTANASNDSYMFTNNDGTG
NSSSLVPFDLSYAARICLQNNNQNNNKMVPPRALVQLLATMGAYEEAIEQALSVNDVDLA
KQMADQVQTMLTSSSSSSSATADQHHHSNLDLAKRLWLKIAKHVIKNIYAKPDDDYSKDH
QQQQHGQQQENTVNFDISMATSILNECSLLKIEDILPYFPEYLTIDHFKSAICQSLENYN
EHIESLRDDMKLATESAQQIREEIAKLRNRFTIINSTDICCLCSFPAINEHFYSFPSCGH
LFHHKCLIQEIVEYLDNDNRIRLEAMLSEMKSIQNQLQTLMMTIPGGGNNNGVVKQNNQN
SSFEQQQQQQSSTTESSLSLTNRLENLNERIEDLIGSECLLCGNLMIETIDKPFIDEYRD
RDQQRGWI
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggcatctattctggaacaatatgatgcttataattatcaatcgggaccaattcgtggc
ggtacgatcacacaaaatgagggaatcattaatctacgatccgatcaattggaaccaatt
tttacgaaaaataaaattgattttcgtcccaattatccgataacaaatatggtcatatcc
aataatcagcttttattatcaatggaaaattttcatctactcaaaattgatctgatgaat
ccaacaaaaccaacagaaattgatcttaatccatattttgttccgattaaagctccaaat
agaccagtgatttgtggcctattcattgataatagtggtcaacattgtttgataactgtt
ggacaacgaatcaaaaataatccatctatggatgttattccatttgaaaatttttattat
tatcgtaaattatcattattgaacaaaatgaaaggtcatatcataacggcggttggttgg
ctcgatcaaccacaacatcaacaatctggacaatgtggaaatttattaatcggtactaat
gagggaaaaattttcgaaacacatctacaatcagatgatagatttcttgcatcacgtgaa
ctttcattttggaaacttatctgtgatttttcaccaacgattgcctctactgctgctaat
ctagattattcatcatccaatttatcaaattcatcaatggatccaaataaaacttcatca
tcatcatcatcatcagtagcaacagcaaacactattgctgtgaaacaagaaccaatttgt
gccataaaattatttcgtttaaaaaatcgtgaattctgtatattgattgcaacaagaaat
cttatctatcaatatattggccggatctctccatcgacaacaacacaattaattggtggc
attaattctggtacttttgctgatatgagtactggtgttggcaatggccaattgattgat
ggacaaccatatctttatcagattatacaaggcccgaacagtcaaaaaacattcaaagag
atgcctggctatataccggcaaccagattagatttgtttcgaccgacaatttctacgaat
atggataataattatccattatcatttggttggttaactgaaccaggtatattctatgga
gatataccatccgatttcggttataaagaacggaaaatttttgataatgctaccgttatt
atgtattctgatctaaatcaaccattatcggattcggaacattcccgtgaatcatctaat
catctgcatcatcatcgatcaataccacaatcattagtgttgaccagatttcatttgatg
cttttgtatccacataaacttcgtgtttattgtgtattgaatcgtcaattagtatgggaa
gatcgttttgttggtgaaccaggtgaaaatcttgttaaagatccaatacgtaatacaatt
tggtcgtatacaaaaagttctgtttatcgttatcgtattaatcaagaagatcgtaatatt
tgggaaatttatttgaagaaaaaagattttgaacaagctaaacattttgcacgtaatgat
ctgataaaaatggatcgaatcatttgtgaagaagcattatatcattttgctcataaaaac
tatatgaaaagtgctcaacttttcacacaaacacgtacaaaatcattcgaagaaattaca
ttgaaatttattgaacttcgtgatgaaaatcaagaagcgttgaaagaatttctattgaat
aaattgacaacattatcgtcggaaaaagaacgtacacaaataatcattttgttattgtgg
ttattcgaattgatgctcaatcaattggctttattgaaatcatcggcccaagattattct
ataacgaatgataatcaaagtgatgatcatgatcatgaaaagttgaaatgtgaacaagat
aaaattgaacaatgtctgaaaaggataatttccaacgcaaattatcgacaaccattacgt
aataatcgaaaaattttctatgatttaatcctaaatcatgataatcaagaaatgtatgaa
ttttttgctaatgaaattaatgattttgattgcctattggatcattattgtcgtgtaagg
aattatcgccaagcgatcaatttgatgagacgtgaagaatgtttggattattattaccac
tattcaccattgataattcaacatttaccaaaagaattgattgattgtttgataccattg
gctagtgaattagatatggccaaattaataccatcattagtacattttgatcattcaaat
gatgatgatcattctgtaaatgatgaacgacgtgaacatcaatgcaaagaaattttacgt
tttctagaattctgtgtatacgatcttaagatccgagatggccttgtacataattatttt
cttgcattaatggtacaatatgaaccggataaattactttcatatttgaatgatgtttca
caacaaacggccaatgcatccaatgattcttatatgtttacaaataatgatggcactggt
aattcatcatcattggttccatttgatctaagttatgcagcaagaatttgtttacagaat
aataatcagaataacaataaaatggtaccaccacgtgccctagtacagctattggcaaca
atgggtgcatatgaagaagctattgaacaggcgttatcagtaaatgatgttgatctagct
aaacagatggctgatcaagtccaaacaatgttaacatcatcatcatcatcatcatcggcg
acagcagatcagcatcatcactcaaatctagatttagccaaacgtttatggttaaaaatt
gccaaacatgtgattaaaaatatctatgctaaaccagatgatgattatagtaaagaccat
caacaacaacagcatggacagcagcaagaaaacacggtaaactttgatatatcaatggca
acaagtatattgaatgaatgttcattattaaaaattgaagatattctgccatattttcct
gaatatctaactattgatcattttaaatcggcaatttgtcaatcattggagaattataat
gaacatattgaatcattacgtgatgatatgaaattagctacagaatcagcacaacaaata
cgtgaagagattgcaaaattacgaaatcgttttactattataaattctacagatatttgt
tgtttatgttcatttccagccataaatgaacatttttattcatttccatcatgtggccat
ttatttcatcataaatgtttaatacaagaaattgttgaatatcttgataatgataatcgt
atacgattagaagcaatgttatcagaaatgaaatcaatacagaatcaattacaaacattg
atgatgacaatacccggtggtggcaataataatggtgttgttaaacaaaataatcaaaat
tcatcattcgaacagcaacaacaacaacaatcatcgacaacagaatcatcattatcatta
acaaatcgtttagaaaatctgaatgaacgaattgaagatctaatcggtagtgaatgtctt
ttatgtggtaatctaatgattgagaccattgataaaccatttattgatgaatatagagat
cgtgaccagcaacgtggttggatttga
DBGET
integrated database retrieval system
