Dermatophagoides farinae (American house dust mite): 124491108
Help
Entry
124491108 CDS
T08043
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124491108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfr03019
]
124491108
03036 Chromosome and associated proteins [BR:
dfr03036
]
124491108
Messenger RNA biogenesis [BR:
dfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124491108
Chromosome and associated proteins [BR:
dfr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124491108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup96
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
124491108
NCBI-ProteinID:
XP_046909677
LinkDB
All DBs
Position
Unknown
AA seq
1704 aa
AA seq
DB search
MFGQSTSTGTFGQPSAFNTTVTPFGSIGATQQPQSTLFGQTGTQQSSLFGSTGLTQPATS
TLFGATQPQTNTFGTQSAFGGGTSLFGNTATNNPQATQTQNSIFANANRFGTSNTFGTNT
GLSGTMNIATGTTIKFQPQTSTDTMVKNGQTQSTSINIRLQCITCMREYDTKSLEELRLE
DYATGRKGPQQQTGLFGASTIGNPTGTSTFGTGSLGTGQPNAFGQTSTGSSLFGNTQKPF
GSIAPTTVATTSMFNSGLSTAGTSGLFGQNTTQTAFGQTNDNKSLSFFGQQPSSTSQPFS
FGQTNTLGTNQPSTSNSLFGNTGTTSSIFGQNQNPLATNKPMFGSSLTPFGQTQPAQQQQ
QQTGTSLFGATNPTSQTGGIFGSSTSQPSLFNANQSTLGKPGAFSFPGTQTLNQTSTFNP
TSNSSTLFGNTGSTANAFGTGTTGSLFGSNNTFGASNFGSFGAGTNASQPFGSTNIGFNL
GGTSTGSTFGNTFGTGLSTNTFGQNAGLSTGGFFGSNLNQASQQINGVGTTGTNSNAPSI
NTDQIITRLKTMPYGTLPPILSENSLTANSKTKFTTDPKTLNQYKLNAKSKTEVNKVQRV
PVFGKPTTLLFDGLDDESPENLKSAADIFKPRQNIKKLVLNKSDSGSNNSTSQFSATILK
TSTLTKPVASSSLHNVSDSFNKEKESSKISSIPTVDKDASPADNTINILNGKQTSEQIDS
ASKDNQTSRKNLSNSSTASISSPEKSFSNLYGPLNFSSNSIMGGDDRLETSINMANYVPP
KCGVILTRTDYYTIPSLDECDQFYNPDDDTCVVDSFTVGRLDYGSIFWRGPLNIKGINLD
EIVHIRRKEVIVYPDDDLKPPEGEGLNRPAQITLDQVWPVDKTTREFIKDTERLRLMKYA
ERLEKVTIKLGATFKEYRSDTGSWVFQVKHFSKYGLDADEEDVEIIEPAKGDQQKSDPYS
KKSQQTYVKQTYDMSGQKLNLHLNGFHSNELDQMNNQQQQQQLNGHSLDSRDILFNQQSP
YFASKSSENASEPKTQGKYGSSGLFIADQIDESQPYESPLSISIKAKNDEYNLMRSALFV
EDDEIETMSKKCKNLSFIKMTPSTSQMSQIMPSVATSSTLFPARFLKATIPKKRRLIFEQ
QTTSPQQKANAYSISNAEYPKAHFANGSNKFCLIVGNDVLIFNVDLLRLDQTESIEKLEL
QFNSHSTIENNEDQQIQQLQEKSRIPPLIRTNAYSLNQMVDSNLNLLIEALYGELSETTD
YARHQERLRRILKWLYNYNKTLPVPESSFDRIVHFLTTNELEFAVTECINSKLARLSYLI
SCGPYCRKELMIAQLDLWKRSESDVFIVKDLLKIYIILSGLSSWTMSTGQIIDTLDGLEW
TQQLTLLLLYKTRTGVEMIGTNLVRTAIEELTIHPNTVEYHMLAQHQPWVAITSATNYLD
SWMLQEQLQSYNVIIEDVSTNKCDSINIFMASQCRDLYWSLFFALHIRNDYIRTFYVKEL
LARNAKQLMDDLDLEHLIVEKYHIDSRLLSEAKLYWARTKRYHRDIAMNLLIIGQYKEAH
DILVDRIFPELVINEDYEEIRHLIDKLRPHRHLIPNWDLTGAGIYDIFIKLLCFGQSFAG
NDGDSSIQHYRKLIENFNVHQLLTPTNRHVLCQSQMARVANIIHAELNMGMFAYHTAVPH
DYSLLELRSNAYKIFELKTAAINV
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgtttggccaaagtacttctactggtacatttggtcagccttcagctttcaatacaacg
gttacaccgtttggaagtattggtgccacacaacaaccacaatcaacgttgttcggacaa
actggcacccaacaatcatcattattcggtagtactgggctaactcagcctgccaccagt
acgttgtttggtgcaacacaaccacaaaccaatacatttggtacgcaatctgcttttggt
ggtggaacatcgttatttggaaatacagctaccaataatccacaggcgacacaaacacag
aattctatatttgcaaatgccaatcgttttggaacttcgaatacatttggcaccaacact
ggtttgagtggaacaatgaatatagcaacaggtactacaattaaatttcaaccacaaaca
tcaaccgatacgatggttaagaatggtcaaacacaaagtacaagtatcaatattcgttta
caatgcattacttgtatgcgtgaatatgatactaaatcattggaagagcttcgtcttgaa
gattatgcaactggtcgtaaaggaccacaacaacagacaggattgtttggtgcatcaacg
atcggaaatccaacaggaacttcaacatttggtacaggaagtttaggcacaggacagccc
aatgcattcggtcagacatcgactggaagtagtctgtttggtaatacacaaaaacctttt
ggctcgattgcaccgactactgtagccacaacatcaatgttcaattctggtttatcaact
gctggcacatccgggttatttggtcagaacacaacgcaaacagcgtttggtcaaactaac
gataataaatctctcagtttttttggacaacagccatcatccacctctcagccattctcg
tttggccagacaaacacattaggcactaatcaaccatcaacatcaaattcattgtttggc
aacactggaacgactagctctatttttggccaaaatcaaaatcctttggccactaataaa
ccaatgttcggaagtagtttgacgccatttggtcagacacaaccagcacaacaacagcaa
caacaaactgggactagcctttttggtgctacaaatcctacaagtcaaactggtggaatt
tttggctcaagcacctcacaaccatcgctattcaatgcaaatcaatcgacattaggtaaa
ccgggtgcattctcgtttcctggaactcaaacattaaatcaaacatcaacatttaatcca
acttccaattcatcaacattattcgggaatactggatcaactgcaaatgcatttggcacc
ggaactactggatcattattcggatcgaataatacgtttggtgcaagtaattttggttca
tttggagctggtacaaatgcttctcaaccatttggtagtacgaatatcggtttcaatctg
ggcggaacatccaccggttcaacatttggaaacacatttggtaccggtctcagtactaat
acatttggccagaatgctggcctctcgactggtggttttttcggtagtaatctcaatcaa
gcttcacaacaaataaatggtgttggaacaacaggcaccaattctaatgctccatcgatc
aatacagatcaaataataactcgtttaaaaacgatgccatacggtacattaccaccgatt
ttatcggaaaattcattaacggctaattcgaaaaccaaatttacaactgatccgaaaaca
ttgaatcaatataaattgaatgccaaatcaaaaaccgaagtcaacaaagttcaacgtgtt
cctgttttcggaaaaccaacaacattgctatttgatggacttgatgatgaaagtcccgaa
aatttaaaatcggctgctgatatatttaaaccgagacagaatatcaagaaattagtccta
aataaatctgattcgggctcaaataattctaccagtcaattttcggcaacaattttgaag
acatcaacattgacgaagcctgtagcatcttcatcgttacataatgtatcagattctttt
aacaaggaaaaggaatcgtcaaaaatttcttcaataccaactgttgataaagatgcatca
ccagctgataatacaattaacatattgaatggaaaacaaacatccgaacaaatagattca
gcttctaaagacaatcaaacttcaagaaaaaatctcagtaattcatcaaccgctagcatt
tcttcaccggaaaaatctttttcaaatctttatggaccattaaatttctcatcaaattca
ataatgggcggtgatgatcgcctggaaacgtcgataaatatggcaaattatgtaccaccc
aaatgtggtgtcattttaactcgtacggattactatacgattccatcattggatgaatgt
gatcaattttataatccagatgatgatacctgtgtggttgattcattcactgtgggtcga
cttgattatggctcaattttctggcgtggaccacttaatatcaaaggaattaatttagat
gaaattgttcatatccgacgtaaagaagtgattgtatatccagatgatgatctaaaacca
cccgaaggtgaaggtttgaatcgtccagcgcaaatcacattggatcaagtttggccggtt
gacaagacaaccagagaattcattaaggatactgaacgtttgcgtttgatgaaatatgct
gaacgtttagaaaaggtgaccataaaattgggtgcgacattcaaagaatatcgttccgat
actggatcatgggttttccaggtgaaacatttcagtaaatatggtttagatgctgatgaa
gaagatgtcgaaattatcgaacctgccaaaggagatcaacaaaaatcagatccgtattca
aaaaaatctcaacagacttatgtcaaacaaacttatgatatgagtggacaaaaattgaac
cttcatcttaatggttttcattcgaatgaattagatcaaatgaataatcaacaacaacag
caacagttgaatggccattctttagattcccgagatatattgttcaatcaacaaagtcca
tatttcgcaagtaaatcaagtgaaaatgcatccgaaccaaaaacacaaggaaaatacggt
agttctggcttgtttattgctgatcaaattgatgaaagtcaaccatatgaatcaccgtta
tcaatatcaattaaagccaaaaatgatgaatataatttgatgcgttcggcgttatttgtt
gaagatgatgaaattgaaacaatgtctaagaaatgtaaaaatttatctttcatcaaaatg
acaccatcaaccagtcaaatgagtcaaataatgccatcggttgccacaagttcgacatta
tttccagccagattcctcaaagcaaccattccgaaaaaacgacgattgatttttgaacaa
caaactacttcgccacaacaaaaagcgaatgcttattcaatatcgaatgcagaataccca
aaagcacatttcgctaatggatcgaataaattttgccttattgtcggtaacgatgttttg
attttcaatgttgatcttcttcgattggatcaaacagaatcgattgaaaaactggaacta
caattcaattcgcattccactattgagaataacgaagatcaacaaattcaacagctgcaa
gaaaaatcaagaatcccaccattgattcgtacaaatgcctatagcttaaatcaaatggta
gattctaatctcaatttattgattgaagctttgtatggagaattaagtgaaacaactgat
tatgctcgccaccaagaacgtcttcgtcgaatattaaaatggttatataactacaacaaa
actttacccgttccagaaagttcattcgatcgtattgtccacttcctgactactaacgag
ctggaatttgctgttaccgaatgtattaattcgaaacttgcacggttgtcatatttaatt
tcatgtggcccatattgccgaaaagaattgatgatcgcacagctcgacctctggaaacgt
tccgaatctgatgtattcattgtgaaagatttgttgaaaatctatatcattctaagcgga
ttatcgtcatggacaatgagcactggacagattattgatactttggatgggcttgaatgg
acacaacaattgacattattgttactgtataaaacacgtacaggtgtcgaaatgattggt
accaatttggttcgtacagccattgaagaattaactattcaccctaatactgttgaatat
catatgcttgctcaacatcagccatgggttgccataacatcggcaacaaattatttagat
tcttggatgttacaagaacagcttcaaagttataacgtgatcatcgaagatgtttcaaca
aacaaatgtgattcgatcaatatttttatggcttcacaatgtcgtgatttatattggtca
ttattttttgctcttcatatccgtaatgattatattcgaacattctatgttaaagaattg
ctcgcgagaaatgctaaacaattgatggatgatctagatttggagcacttaatagtggag
aaatatcatatcgattctcgtttattatccgaagctaaactttattgggctcgtaccaaa
cgatatcatcgtgatatagcaatgaatctattgataattggacagtataaagaagctcat
gatatacttgttgatcgcatctttcctgaattggtcatcaatgaagattacgaagaaatt
cgccatctcattgacaaattacgtccacatagacatttgataccgaattgggatctaacc
ggagcaggaatctatgacatattcattaaattactttgttttggacaatcatttgctggc
aatgatggcgattctagcattcaacattatcgtaaattgattgaaaatttcaatgtccat
caacttctaacgccaactaatcgtcatgttctatgtcaaagtcagatggctcgtgttgct
aatatcattcatgctgaattgaatatgggaatgtttgcctatcacacagctgtaccacat
gattattccctattggaattgcgatcaaatgcatacaaaatatttgaattgaaaactgcc
gccattaatgtttga
DBGET
integrated database retrieval system
