Dermatophagoides farinae (American house dust mite): 124491257
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Entry
124491257 CDS
T08043
Name
(RefSeq) uncharacterized protein LOC124491257
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124491257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfr03041
]
124491257
03009 Ribosome biogenesis [BR:
dfr03009
]
124491257
Enzymes [BR:
dfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124491257
Spliceosome [BR:
dfr03041
]
Complex A
U2 snRNP components
U2 related factors
124491257
Complex B
124491257
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
124491257
Ribosome biogenesis [BR:
dfr03009
]
Eukaryotic type
90S particles
Helicases
124491257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
OTU
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
SRP54
AAA_19
nSTAND3
PhoH
Peptidase_C65
AAA_25
AAA_23
Motif
Other DBs
NCBI-GeneID:
124491257
NCBI-ProteinID:
XP_046909848
LinkDB
All DBs
Position
Unknown
AA seq
1382 aa
AA seq
DB search
MTILPKKKQSKQQQSTNEEQHHVVGHSSNVVVVGTQHGGGQSSQINGPSSQLSTTNGRIH
VNHQWSTTQRNHIVVNGDCPVDKRPAPDNGHSTHGSQHSSKRRHRIQHQQQQQQQQQRTV
VVERCDSGERDTTTTTKHQHPRTIANIRSIGSNSSSSSNNSAGTHSDPDSMIAIPGCSSN
NDNNVEGEEEEEEEEEEDFSGYNSGDEYQRNAQNNDPSAQTDWEEKERQFERIMRKKGFN
IKKMSEDGACLFRAVADQVYGDQEMHSAVRKLCMDYMEKNGDYFSQYVTENFADYIRRKR
CEHIHGNHIEIQALSEIFNRPIQVYHYSSEPINIENCQKTDNEPIRLSYHRNTHYNSIVN
PYKATIGVGLGLPAFKPGIAEKSLVEKALFMSEQHELEQAMLEDKIRATDWEATNEAIEE
QIARESYIEWLRDNERRSRTTTTTTATTKSSSATSTTLTNQNNNNLIDGEQISNNNNMNS
SSSSSTTQLSPRCYSPRCSSSPSSSSMMMMKGGVGAVSSSSNHHQQRSSPKRSNEPPPPP
SSSSSSRSPKGATTTITTTNDDGSISAAASTFLHELPASYLGLNDWDVSDPLLAQVLVQS
QAEYLESLKQQQQQQQRINSDVDPNNESSSSSSMINNLNYDLISSLPSTSSTTNHASHDR
IIIFSIVFQTFSFKYCLLTMKSDDQDDGSSSSASNSATTTTAGINPNTNTAYSPRYYELF
RKRIQLPVWEYQSKFIDQLDNNQIIVLVGETGSGKTTQIPQWCVDYCRKRKIKIGVSCTQ
PRRVAAMSVAQRVAEEMDVQLGQEVGFSIRFEDCCSPRTILKYCTDGMLLREAMSDPLLE
AYSIILLDEAHERTLSTDILMGVLKQVVTKRNDLKIIVMSATLDAGKFQQYFDNAPLMNV
PGRTHPVEIFYTPEPERDYLEAAIRTVIQIHVCEEEGDCLVFLTGQEEIEEACKRIKREI
DNLGPDVGPLKSIPLYSTLPPNLQQRIFEPAPPNKPNGAIGRKVVVSTNIAETSLTIDGV
VYVIDPGFSKQKVYNPRIRVESLLVSPISRASAQQRAGRAGRTKPGKCFRLYTEKAFKND
MQEQTYPEILRSNLGTVVLQLKKLGIHDLVHFDFMDPPAPETLMRALELLNYIGALDDEG
EMTDIGAIMAEFPLDPQLSKMLISSCDYNCSNEILSIASMLSVPQCFVRPNEHKKAADDA
KLRFAHIDGDHLTLLNVYHAFKQNHEDPNWCYENFINYRSLKQADNVRQQLARIMDRFNL
KRISTEFTSKDYYLNIRKALVSGYFMQIAHLERNGAYLTIKDNQIVYLHPSSVLDHKPDW
VLYNEFVLTAKNYIRTVTEIKPEWLLRIAPVYYNLDYFPQCEAKRQLEFVKNKMIAQREK
RV
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgacgatattaccgaaaaagaaacaatcaaaacagcaacaatctactaatgaagaacaa
catcatgttgttggtcattcatcaaatgttgttgttgtaggtacacaacacggtggtgga
caatcatcacaaatcaatggaccatcatcacaattatcaacaacaaatggacgtattcat
gttaatcatcaatggtcaacaacacaacgtaatcatattgttgtaaatggtgattgtcca
gtagataaacgtccagcaccggataatggacattcaacgcatggatcacaacattcaagt
aaacgtagacatcgtatacaacaccagcagcaacaacaacaacaacaacaacgtacagtg
gttgttgaaagatgtgattccggtgaacgtgatacaacaacgacaacaaaacatcaacat
ccacgaacaattgcaaatatacgttcaattggatcgaattcatcatcatcatcgaataat
tctgcaggaacacattctgatcctgattcaatgatagctataccgggttgtagtagcaat
aatgataataatgttgaaggtgaagaagaagaagaagaagaagaagaagaagatttttcc
ggttataatagcggtgatgaatatcaacgtaatgcccaaaataatgatccatccgcacaa
acggattgggaagaaaaagaacgtcaatttgaacgtatcatgcgtaagaaaggatttaat
attaaaaaaatgtctgaagatggtgcttgtctatttcgtgctgtcgccgatcaagtttat
ggtgatcaagaaatgcattcagctgtacggaaattatgtatggattatatggaaaagaat
ggtgattatttttcacaatatgtaacggaaaattttgccgattatatccgccgcaaacgt
tgtgaacatatacatggcaatcatattgaaattcaagcattgagtgaaatatttaatcgt
ccaatacaagtatatcattattcatcggaaccaattaatattgaaaattgtcaaaaaact
gataatgaaccaatacgattatcatatcatcgtaatacacattataattcaatagtgaat
ccatataaagcaaccatcggagttggtttaggactaccggcatttaagcctggtatagcg
gaaaaatcattggttgaaaaagcattatttatgtctgaacaacatgaattagaacaggca
atgttggaagataaaattcgtgctacagattgggaagccacgaatgaagctattgaagaa
caaattgcacgtgaatcatatattgaatggttacgtgataatgaacgaagatcacgtaca
acaacaacaacaacggcgacaacaaaatcatcaagtgctacctcaacaacattgacaaac
cagaataataataatcttatagatggtgaacagatttcaaacaacaacaatatgaattct
tcgtcatcatcatcaacaacacaattatcaccaagatgttattcaccacgatgttcatca
tcaccatcatcatcatctatgatgatgatgaaaggtggtgttggtgctgtatcttcttcc
tcaaatcatcatcaacaacgttcaagtccaaaacgttcgaatgaaccaccaccaccacca
tcatcatcatcatcatcgagaagtccaaaaggcgcaacaacaacaataacgacaacaaat
gatgatggttcgatttcagctgctgcatcaacatttcttcatgaattaccagcatcatat
cttggtctaaatgattgggatgtatccgatccattattagctcaagtattggtacaatca
caagctgaatatttggaatcattaaaacaacaacaacaacagcaacaacgaataaattca
gatgtagatccaaataatgaatcatcatcatcatcatcaatgatcaacaatttgaattat
gatttaatatcgtcgcttccatcgacatcttccactactaaccacgcatctcatgatcga
atcattattttctcaattgtttttcaaacattttcatttaaatattgtcttttaacaatg
aaaagtgatgatcaagacgatggaagttcatcatcggcttcaaattcagcaacgacaacc
acagccggaatcaatccaaatacaaacacagcatattcaccgcgatattatgaattattt
cgtaaacgaatacagctacctgtatgggaatatcaaagtaaattcatcgatcaacttgac
aataatcagataatcgttttagttggtgaaaccggctctggaaaaacaacacaaatacca
caatggtgtgtagattattgccgtaaacgaaagataaaaattggtgtatcctgtacacaa
ccacgacgagtagcagcaatgtctgtcgctcaacgtgttgctgaagaaatggacgtacaa
cttggtcaagaagttggtttttccattcgttttgaagattgttgttccccacgtaccata
ttgaaatattgtaccgatggtatgttattacgggaagctatgtccgatccattattagaa
gcatacagtattatattgttggatgaagcacatgaacgcacattatccaccgatatattg
atgggtgtattgaaacaagtcgtaacgaaacgtaatgatttgaaaatcattgttatgagc
gctacgttagatgctggaaaatttcaacaatattttgataatgcaccattgatgaatgta
cctgggcgtacacatcctgtggaaatattctacacaccagaaccagaacgtgattacttg
gaagccgctattcgaaccgttatacaaattcatgtatgtgaagaagaaggtgattgtctt
gtttttcttaccggccaagaagaaattgaagaagcatgtaaacgtattaaacgtgaaatt
gataatcttggaccagatgttggaccattgaaaagtataccattatattcaacattacca
cctaatcttcaacaacgaatattcgaaccggcaccaccgaataaaccaaacggtgccatt
ggacgtaaagtagttgtatcgacaaatattgccgaaacatcattaactatcgatggtgtt
gtctatgttattgatccaggattttctaaacaaaaagtttataatccaagaattcgtgtt
gaatcattattggtgtcaccgatatcacgagcatcggcacaacaacgtgctggtcgtgct
ggccgtacaaaaccaggtaaatgttttcggctctatacagaaaaagcattcaaaaatgat
atgcaagagcaaacatatccagaaattcttcgttccaatcttggtacggttgttttgcaa
ctaaaaaaacttggcattcatgatcttgtacattttgattttatggacccacctgcgcct
gaaacattgatgcgtgccctggaattattaaattatatcggcgcccttgatgatgaaggt
gaaatgaccgatatcggcgctattatggctgaatttccattggatccacagctatcgaaa
atgttgatttcatcatgcgattataattgttccaatgaaatattatcaattgcatcaatg
ttatcggtaccacaatgttttgttcgaccaaatgaacataaaaaagctgcagatgatgca
aaattacgttttgcacatatcgatggtgatcatcttaccctgttgaatgtttatcatgca
ttcaaacaaaatcatgaggatccaaattggtgttatgaaaattttattaattatcgttca
ttaaaacaggcggataatgtacgacaacaattggcaagaataatggatcgttttaatttg
aaacgtatttcaactgaatttacatccaaagattattatctaaatattcgtaaagctcta
gtttccggatattttatgcagattgcacatctagaacgtaatggagcatatctaacgata
aaagataatcaaattgtctatctacatccatcatcggtattggatcataaaccagattgg
gttctatataatgaatttgtattgacagctaaaaattatatacgaaccgttacggaaatt
aaacctgaatggcttctacgtattgcacctgtctattataatttggattattttccacaa
tgtgaagctaaacgacaattggaatttgttaaaaataaaatgattgctcaacgtgaaaaa
cgtgtctga
DBGET
integrated database retrieval system
