Dermatophagoides farinae (American house dust mite): 124491430
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Entry
124491430 CDS
T08043
Name
(RefSeq) ATP-dependent RNA helicase me31b-like isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124491430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfr03019
]
124491430
03036 Chromosome and associated proteins [BR:
dfr03036
]
124491430
Enzymes [BR:
dfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124491430
Messenger RNA biogenesis [BR:
dfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124491430
mRNA degradation factors
5'-3' decay
Decapping complex
124491430
Chromosome and associated proteins [BR:
dfr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
124491430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
124491430
NCBI-ProteinID:
XP_046910021
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MATNATLTMSNNNHANNGINSSNDWKAKLKVPPKDNRIKTSDVTSTRGNDFEEFCLKREL
LMGIFEQGWEKPSPIQEAAIPVALLGNDILARAKNGTGKTGAYTIPLLQKIDVTNNAIQA
LVVVPTRELAMQTSNICMELGRHLGIRVMVTTGGTNLKDDIMRIYENVHVVVATPGRILD
LVEKKVAALNNCKYFVLDEADKLLGQDFQGMLDTLISYLPEERQILLFSATFPITVEQFM
KKHLKNPHEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRVE
LLAKKIAELGYSCYYIHARMSQPHRNRVFHDFRKGLCRNLVCSDLFTRGIDIQAVNVVIN
FDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRDLLHKVEAELNTTIKPIPKVIDPTL
YVAEAQAENADNN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaacgcaacgttaacaatgtccaataataatcatgctaataacggaatcaat
agtagcaacgattggaaagctaaacttaaggttccaccgaaagataatcgtatcaaaaca
tctgatgttacatcgacacgtggcaatgattttgaagaattttgtttgaaacgtgaacta
ttgatgggcatatttgaacaaggttgggagaaaccatcaccaattcaagaagcagctata
ccagtcgcattgcttggtaatgatatattggctcgagctaaaaatggtaccggaaagact
ggtgcatacactattccattgttgcaaaagattgatgtgaccaataatgctatccaagca
ttagtagttgtacctactcgtgaattggccatgcaaacatcaaacatttgtatggagctc
ggtcgtcatctgggaattcgagtaatggtcactactggtggaactaatctcaaagatgac
attatgcgtatctatgaaaatgtgcacgttgtggtcgcaactcctggacgtattcttgat
ctggtcgagaaaaaggtggccgcattgaataattgcaaatatttcgtattggatgaagct
gacaaattgttgggccaagattttcagggtatgctcgatacactgatatcgtatttacct
gaagagcgacagatattgttattctcggcaacatttccaattacggttgaacaattcatg
aagaaacatttgaaaaatccacatgaaataaatcttatggaagaattaaccttgaaaggt
gtgactcaatactatgcgtttgtacaggaacgacaaaaggtccattgcttgaatacattg
ttctcaaagctacaaattaatcaatcgatcatcttctgtaattctacccaaagagtggaa
ttgttagccaagaagattgctgaacttggatattcatgttattacattcatgctcgtatg
tcacagccacatcgtaatcgtgtgtttcatgattttcgaaaaggtctttgccgaaatctt
gtatgcagtgatctctttacacgtggtatcgatattcaagctgtcaatgttgtcattaat
ttcgatttccccaaaatggccgaaacctatcttcatcgtatcggtcgatcaggacgtttt
ggacatttaggtattgctatcaatttgattacctatgaagatcgtgatttgttacacaaa
gttgaagcggaactaaacacaaccattaaaccaatacccaaagttattgatccaacatta
tatgttgctgaagcacaagctgaaaatgctgataataactaa
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