Dermatophagoides farinae (American house dust mite): 124491932
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Entry
124491932 CDS
T08043
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124491932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfr03041
]
124491932
Enzymes [BR:
dfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124491932
Spliceosome [BR:
dfr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
124491932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_19
AAA_22
AAA_30
nSTAND3
Thioredox_PDIA6_C
Flavi_DEAD
nSTAND_NTPase5
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
124491932
NCBI-ProteinID:
XP_046910616
LinkDB
All DBs
Position
1:2521227..2524470
Genome browser
AA seq
900 aa
AA seq
DB search
MSSTKRSYVPTDSDSEHEERMKDLKARDEFAQRLQEKDKEKTRNIAVKSDKKGLQEASKR
LKLETEDQTLVIPQLRKESRRQYLAKRKDDQLTLLEAAIADEEYLFGKEKLTESEQKRQD
YNRKILELARQHDQVSEFANIQRYHIPSEDQTEEYKEVNEGENVPNSEQRKWEEERLGSA
MLHFGAKDAKQKNQTKEYDLIVDGIEIDFVKALTLAGDDDIIQDDNENKQMTEKEIKKLS
IEETRRSLPVFPFKDDLIAAINDHQVLIIEGETGSGKTTQIPQYLIDAGYTKDGKKIGCT
QPRRVAAMSVAARVAEEMNTKLGSLVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDL
ASYSVIIIDEAHERTLHTDILFGLVKDIGRFRPDIKLLISSATLDAEKFSDFFDGAPVFR
IPGRRFPVDIYYTKAPEADYIDACVVTILQIHITQKLGDILVFLPGQEEIEQCQELLQER
VRRLGTRVKELLIRPIYANLPSDIQAQVFEPTLPNARKVVLATNIAETSITIDNIIYVID
PGYCKQNSFNPRTGMAALVVVPISKASANQRAGRSGRVAPGKCFRLFTAWAFQNELEDST
IPEIQRVHLGNVVLMLKSLGINDIVHFDYLDPPSAEALIIALEQLYALGALNHLGELTRL
GRRMAEFPLDPMMSRALLASEKYKCAEEMLTICSMLSVNSSVFYRPKDKAVFADTARKRF
FMEGGDHLTLLNVYKQWMDSGYSKQWCMENFIQYRSMCRARDVRDQLEKLMERVEVEVKS
CDNDNVAIRKAITSGYFYHTAKLSKGGNYRTIKGNNTVLIHPNSTLFDEMPRCVLYHELV
LTTKEYMRQVIEINPLWLLEVAPHYYKPKDIDESGTLGKKMPKQVGKSLADLTRTYPSNE
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgacaaaacgttcgtatgtgcctactgattcggattctgaacatgaagaacgt
atgaaagatctcaaagctcgtgatgaatttgcacagcggttacaagaaaaagataaagaa
aaaacgcgaaatatagctgtcaaaagtgataaaaaaggtctacaagaagcatcgaaacga
ttgaaattagaaaccgaagatcaaacattggttataccgcaattgcgtaaagaatctcgt
cgacaatatttagccaaacgtaaagatgatcaactgacgcttttagaggcagctatcgca
gatgaagaatatctatttggaaaagaaaaactaaccgaaagtgaacagaagcgtcaggat
tataatagaaaaatattagaactagcacgacaacatgatcaagtttccgaattcgccaat
atacaacgatatcatattccaagtgaagatcaaacagaagaatataaagaagttaatgaa
ggtgaaaatgttccaaattcggaacaaagaaaatgggaagaagaacgattaggaagtgct
atgcttcattttggtgctaaagatgctaaacaaaaaaatcagacgaaagaatatgatctt
attgtagatggtatcgaaattgattttgtcaaagctctaacactcgccggtgatgatgac
atcatccaagatgacaatgaaaataaacaaatgacagaaaaagaaattaaaaaactatcc
atcgaagaaactcgtcgatcattaccagtatttccatttaaagatgatttaattgccgca
atcaatgatcatcaagtgttgattatcgaaggtgaaactggttcaggaaaaactactcaa
attcctcaatatttaattgatgctggttacactaaagatggtaaaaaaattggttgtaca
caaccacgtcgagtggctgccatgagtgtggctgcacgtgttgccgaagagatgaacaca
aaactgggttcacttgtgggctattcaattcgtttcgaagattgtacaagtgaaaaaacc
atacttaaatatatgactgatggtatgttattacgagaattccttggcgaaccagatcta
gcatcgtattctgtgataatcatcgatgaagcacacgaacgaacattacatactgatata
ctatttggtttggtcaaagatattggacgttttcgaccagatattaaattattgatttca
tcggccaccttggatgcggaaaaattcagtgatttttttgatggtgcaccagtatttcgt
atacctggtcgacgttttcctgttgatatttattatactaaagcaccggaagccgattat
attgatgcttgtgttgtgaccatattacagattcatatcacacaaaaattgggagatatt
ctcgtatttcttcctggacaagaagaaattgaacaatgtcaggaattattacaagaacga
gttcgtagattaggcactcgtgtaaaagaattactaataagacctatctacgctaatcta
ccttctgatattcaagctcaagtatttgaaccaacactaccaaatgcaagaaaagtggta
ctcgcaacaaacatagccgaaacatcaatcacaattgataatatcatatatgttattgat
cctggttattgtaaacaaaatagttttaatccaagaacaggaatggcagctttagtggta
gtaccaatttcaaaagcaagtgctaatcaacgtgctggccgttctggtcgtgttgcacca
ggaaaatgtttccgattattcacagcatgggcattccaaaatgagcttgaagattctact
ataccggaaatacaacgagtacatcttggaaatgttgttctaatgcttaaaagtctcgga
atcaatgatatcgtacattttgattatttagatccaccatcagcggaagctttgatcatt
gcattagaacaactatatgctcttggagctttgaatcatcttggcgaattaactcgttta
ggtagaaggatggctgaatttccattggatcctatgatgtcacgggcattgttagcttca
gaaaaatataaatgtgctgaagagatgcttaccatttgttcaatgttaagtgtaaattca
tcagtattttatcgtccaaaagataaggcagtttttgccgatacagcacgtaaacgattt
ttcatggaaggtggtgatcatctaaccttattaaatgtatacaaacaatggatggattcc
ggatattcaaaacaatggtgtatggaaaatttcatccaatatcgatcgatgtgtcgagca
agagatgttcgagatcaattggaaaaattaatggaacgtgtagaagttgaagtcaaatca
tgtgataatgataatgtagccattcgtaaagcaattacatctggctatttttaccataca
gcaaaactaagtaaaggtggaaattatcgtacaatcaaaggaaacaatacagttttaata
catccgaattcaacattattcgatgaaatgcctcgatgtgtgctttatcatgaattagta
ttgaccactaaagaatatatgagacaagtgatcgaaatcaatccattatggttacttgaa
gtggcaccacattattataaacctaaagatattgatgaaagtggaacgcttggtaaaaag
atgcccaaacaagtaggaaaatcattggcagatctaactagaacttatccaagcaatgaa
tga
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