Dermatophagoides farinae (American house dust mite): 124492035
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Entry
124492035 CDS
T08043
Name
(RefSeq) uncharacterized protein LOC124492035 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124492035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfr03041
]
124492035
03009 Ribosome biogenesis [BR:
dfr03009
]
124492035
Enzymes [BR:
dfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124492035
Spliceosome [BR:
dfr03041
]
Complex A
U1 snRNP components
U1 related factors
124492035
Complex B
124492035
Ribosome biogenesis [BR:
dfr03009
]
Eukaryotic type
Pre-60S particles
Helicases
124492035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
DSPc
Motif
Other DBs
NCBI-GeneID:
124492035
NCBI-ProteinID:
XP_046910759
LinkDB
All DBs
Position
2:1459218..1463305
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AA seq
621 aa
AA seq
DB search
MTEKKFYNNNSKSNFSNSNGMDRASNDRYNSSSSNDYRSRDGGSIGFNNHQNHYNNGGGG
FNRGRDSFANRSNGSNGFGGGYRSFGKVPIQAPPSDLPVHKNFYRESPATSQRSQYEINQ
WLSTNSVTFRGPRILNPILQFTELIGLPDGVMHAIMKQGFTTPTVIQSQAWPLGLSGRDV
VGIAQTGSGKTLAYALPALVHVDGNAHRRKHGPSVLVLAPTRELAQQIKEVVNMFRTRAV
CVFGGASKGGQRREIDRVQPSIIIACPGRLIDFVEEGAIQLHNISYLVLDEADRMLDMGF
EPQIRKIVDQIPKNRQTLMWSATWPKEVRKLAEDFLVDYVQVNIGSISLAANHNITQIID
ICEESEKMNKLYKLLTQVNANSRDNKTIIFAETKRKVDQLNQQMRSVGWYCSAIHGDKPQ
TERDWALSEFKNGRITILIATDVAARGLDVDDIKFVVNFDYPSCSEDYVHRIGRTGRRDR
KGTAYTFFTLNNAKQANDLIDVLKEAKQDVPAKLFEFASQSHRFGKNVRKRFGSGFYGSS
SFGNSPRFGNGGRFNGFSNGYSNGYANGGGGGAGSGMKRKFDDYSSQSTNNRFAGGKRPN
YGNGTHSSSNSGHTDRFNSYA
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaagaaattctataacaataatagcaaaagcaatttttcgaattcgaacggt
atggatcgtgcatcgaatgaccgttacaacagtagcagcagtaatgattatcgatctcgt
gatggtggtagtatcggtttcaataaccatcaaaatcattacaataatggtggtggtggt
tttaatcgtggccgtgattcatttgcaaatcgatctaatggtagtaatggttttggtggt
ggttatcgaagttttggaaaagttcctattcaggcaccaccatcagatttaccggtgcat
aaaaatttctatcgtgaaagtccggcaactagccaaagatctcaatatgaaattaatcaa
tggctcagcactaatagtgttacatttcgtggaccaagaattttaaatcccatcttacag
tttactgaactcattggattacctgatggtgttatgcatgctattatgaaacaaggtttc
actacaccaaccgtgattcaatcacaagcatggccattaggtttaagtggtcgtgatgtt
gtcggtattgcacagactggttcaggtaaaacattagcatatgcattgccagcattagta
catgttgatggaaatgcccatcgtcgcaaacatggaccaagtgtattggttttggcacct
acccgtgaattggcccaacaaatcaaagaagttgtcaacatgtttcgtacacgtgctgtt
tgtgtttttggtggcgcatcaaaaggtggacaacgtcgtgaaattgatcgtgtacaacca
tcgatcattattgcttgtcctggacgtttgattgatttcgttgaagagggagcaattcaa
ctacataatatcagctatttagttttggatgaagctgatcgtatgcttgacatgggtttc
gaaccacaaattcgtaaaattgttgatcagattccaaaaaatagacaaacactaatgtgg
tcggctacatggccaaaagaagtacgaaaacttgctgaagattttctcgtcgattatgtt
caggtcaatattggttcaatttcattggcagccaatcataatatcacacaaatcattgat
atctgtgaagaaagtgaaaaaatgaacaaattatataaattattgacacaagtgaatgca
aacagtcgcgataataagacaatcatttttgccgaaactaaacgtaaagttgatcaatta
aatcaacaaatgcgatcagttggatggtattgtagtgcaattcatggtgacaaaccacaa
accgaacgagattgggctttgagtgaatttaaaaatggccgtataactattttgattgca
accgatgtggctgctcgtggacttgatgttgacgacattaaatttgtggttaactttgat
tatcctagctgcagtgaagattatgtacatcgtattggacgtaccgggcgtcgtgatcgt
aaaggaacggcatatacattttttacattaaacaatgccaaacaggccaatgatttgatt
gatgttttaaaggaagcaaaacaagacgtaccagctaaattgtttgaatttgctagtcaa
tcacatcgatttggaaaaaatgtacgaaaacgttttggaagtggattttatggttcatca
tcattcggaaattcaccacgttttggtaatggtggccgtttcaatggtttcagtaatgga
tattccaatggttatgctaatggaggaggaggtggagcaggtagtggaatgaaacgaaaa
tttgatgattattcatcacaatcaacaaataatcgttttgctggtggtaaaagaccaaat
tatggtaatggtacacattcatcatcgaatagtggtcatacagatcgattcaatagttat
gcttaa
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