Dermatophagoides farinae (American house dust mite): 124492201
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Entry
124492201 CDS
T08043
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of nonsense transcripts 3A-like
KO
K14328
regulator of nonsense transcripts 3
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03013
Nucleocytoplasmic transport
dfr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124492201
03015 mRNA surveillance pathway
124492201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfr03019
]
124492201
Messenger RNA biogenesis [BR:
dfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
124492201
mRNA cycle factors
P-body specific factors
124492201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
124492201
NCBI-ProteinID:
XP_046910985
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MTQETNNLVKSLSSPSSVTKSKQIIKTDNNKGTDGEKRKSRSHRVQHKPEFMTRIVIRQL
PPTMNEEQFLEVVSPLPAHTEFYYVNGDVNLAEFAFSRAYIKFTNIDDMLIFNQKYDDYI
FLDSKGNEYPAIVEYAPMQKLPRRLNSMNIKKDSKANTIDNDPDFIAFKEALETIQNDGT
AAAQQQQQTITTAEQLLEEIEKNKESKENINQIPPLVEYLNKKRLEKLKIQEEKKRKKDE
LKKKKKEEIRIKKLEKKKEKQMEQKKSKQTTEKSSTKDRIDNKQQIDRKTVIIVSGGSGV
GGDRRKRQEKQQQPSPQSQAATSSSSSNSNIAKDSKKSSSNEMDENSKSNVKIMNKNDDN
QQTPTKNHKEKEKXSNSSNRRDDRQRIRNKDRPTLEIYRPGMGRHQQQQQSIQKSSNSSS
SSNHQQQQQQTGNGDDDNKPKDCHTSSSSSSSSTTIPSKQPGTTNQNYSDKPKYKYRVFT
RTRTNKPNN
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagagaccaataaccttgttaaatctttgtcatcgccatcatcggtgacaaaa
tccaaacaaatcattaaaactgataacaacaaaggaactgatggcgaaaaacgaaaatct
cgttcacatcgtgtacaacataaacccgaattcatgacaagaattgtcattcgacaactt
ccaccgacgatgaatgaagaacaatttttagaggttgtctcaccgttaccagctcacact
gaattctattacgttaatggtgatgtaaatctggctgaatttgcattttctcgtgcttat
attaaattcacaaacattgatgatatgttaattttcaatcaaaaatatgatgactatata
tttttggattctaaaggcaatgaatatcctgccattgtggaatatgcaccaatgcaaaaa
cttcctcgacgattgaattcgatgaatattaaaaaagattccaaagcaaatacaatcgat
aatgatccagattttattgcattcaaagaagcattagaaacaatacaaaatgatggtaca
gcagctgcacaacaacaacaacaaacaattacaactgctgaacaattattggaagagatt
gaaaaaaataaagaatcaaaagagaatattaatcaaataccaccattggttgaatatttg
aataaaaaacggttggaaaaattgaaaattcaagaagagaaaaaacgtaaaaaagatgaa
ttgaaaaagaagaaaaaagaagagattcgtataaaaaaattggaaaagaaaaaagaaaaa
caaatggaacagaaaaaatctaaacaaacgacggaaaaatcatcaacaaaagatcggatt
gataataaacaacagattgatcggaaaactgtcattattgttagtggcggtagcggtgtt
ggtggtgaccgccgaaaacggcaagaaaagcaacaacaaccatcaccacaatcacaagca
gcaacatcatcatcatcatcaaattcgaatattgcaaaagattcgaaaaaatcatcatca
aacgaaatggatgaaaattccaaatccaatgtgaaaattatgaacaaaaatgatgataat
caacaaacgccgacaaaaaatcacaaagaaaaagaaaaantcagtaacagtagtaataga
agagatgatcgtcaacgaattcgaaataaagatcgaccaacattggaaatatatcgacca
ggaatgggacgacatcaacaacagcaacaatcgatacaaaaatcttcaaactcatcatca
tcatctaatcatcaacaacagcaacaacaaacgggcaatggtgatgatgataataaacca
aaagattgtcacacatcatcatcatcatcatcatcttcgacaacaataccatcgaaacaa
ccgggaacaacaaaccaaaattattcggataaaccgaaatacaagtatcgagtatttaca
agaacaagaaccaataaaccaaataattag
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