Dermatophagoides farinae (American house dust mite): 124492201
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Entry
124492201 CDS
T08043
Name
(RefSeq) uncharacterized protein LOC124492201 isoform X2
KO
K14328
regulator of nonsense transcripts 3
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03013
Nucleocytoplasmic transport
dfr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124492201
03015 mRNA surveillance pathway
124492201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfr03019
]
124492201
Messenger RNA biogenesis [BR:
dfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
124492201
mRNA cycle factors
P-body specific factors
124492201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
ArdA
Motif
Other DBs
NCBI-GeneID:
124492201
NCBI-ProteinID:
XP_046910985
LinkDB
All DBs
Position
1:1690694..1694350
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AA seq
487 aa
AA seq
DB search
MTQETNNLVKSLSSPSSATKSKQIIKTDNNKGTDGEKRKSRSHRVQQKPEFMTRIVIRQL
PPTMNEEQFLEVVSPLPAHTEFYYVNGDVNLAEFAFSRAYIKFTNIDDMLIFNQKYDDYI
FLDSKGNEYPAIVEYAPMQKLPRRLNSMNIKKDSKANTIDNDPDFIAFKEALETIQNDGT
TASQQQQTITTAEQLLEEIEKNKESKENINQIPPLVEYLNKKRLEKLKIQEEKKRKKDEL
KKKKKEEIRIKKLEKKKEKQMEQKKSKQTTEKSSTKDRIDNKQQIDRKTVIIVSGGSGVG
GDRRKRQEKQQQPSPQSQAATSSSSSNSNIAKDSKKSSSNEMDENSKSNVKIMNKNDDNQ
QTPTKNHKEKEKSNSNSSNRRDDRQRIRNKDRPTLEIYRPGMGRHQQQQQSIQKSSNSSS
SSNHQQQQQQTGIGDDNKPKDSITQSSPSSSTTIPSKQTGTTNQNYSDKPKYKYRVFTRT
RTNKPNN
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagagaccaataaccttgttaaatctttgtcatcgccatcatcagcgacaaaa
tccaaacaaatcattaaaactgataacaacaaaggaactgatggcgaaaaacgaaaatct
cgttcacatcgtgtacaacaaaaacccgaattcatgacaagaattgtcattcgacaactt
ccaccgacgatgaatgaagaacaatttttagaggttgtctcaccgttaccagctcacact
gaattctattacgttaatggtgatgtaaatctggctgaatttgcattttctcgtgcttat
attaaattcacaaacattgatgatatgttaattttcaatcaaaaatatgatgattatata
tttttggattctaaaggcaatgaatatcctgccattgtggaatatgcaccaatgcaaaaa
cttcctcgacgattgaattcgatgaatattaaaaaagattccaaagcaaatacaatcgat
aatgatccagattttattgcattcaaagaagcattagaaacaatacaaaatgatggtaca
acagcttcacaacaacaacaaacaatcacaactgctgaacaattattggaagagattgaa
aaaaataaagaatcaaaagaaaatattaatcaaataccaccattggttgaatatttgaat
aaaaaacggttggaaaaattgaaaattcaagaagagaaaaaacgtaaaaaagatgaattg
aaaaagaagaaaaaagaagagattcgcataaaaaaattggaaaagaaaaaagaaaaacaa
atggaacagaaaaaatctaaacaaacgacggaaaaatcatcaacaaaagatcggattgat
aataaacaacagattgatcggaaaactgtcattattgttagtggcggtagcggtgttggt
ggtgaccgccgaaaacggcaagaaaagcaacaacaaccatcaccacaatcacaagcagca
acatcatcatcatcatcaaattcgaatattgcaaaagattcgaaaaaatcatcatcaaac
gaaatggatgaaaattccaaatccaatgtgaaaattatgaacaaaaatgatgataatcaa
caaactccgacaaaaaatcacaaagaaaaagaaaaatcaaacagtaacagtagtaataga
agagatgatcgtcaacgaattcgaaataaagatcgaccaacattggaaatatatcgacca
ggaatgggacgacatcaacaacagcaacaatcgatacaaaaatcttcaaactcatcatca
tcatctaatcatcaacaacagcaacaacaaacaggcattggtgatgataataaaccaaaa
gattctatcacacaatcatcaccatcatcttcgacaacaataccatcgaaacaaacggga
acaacaaaccaaaattattcggataaaccgaaatacaagtatcgagtatttacaagaaca
agaaccaataaaccaaataattag
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