Dermatophagoides farinae (American house dust mite): 124492226
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Entry
124492226 CDS
T08043
Name
(RefSeq) nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03013
Nucleocytoplasmic transport
dfr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124492226
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124492226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfr03019
]
124492226
Messenger RNA biogenesis [BR:
dfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124492226
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
124492226
NCBI-ProteinID:
XP_046911019
LinkDB
All DBs
Position
Unknown
AA seq
1338 aa
AA seq
DB search
MSKNDNESRGTIYDKIHNERPTLSSLSEQQKQSEESNNSETATSKSYWTKPPPPTLSSSS
GVERSINTGPGYSRSSLYSSVKRLNLFPKRLAGNDSDVIYNSNSFKRFRANNNNIENLTD
SIHEPSIRSRVSHVSTPSSTSSVALGYLTSEFGRKQYPKAPLSITGRDSPSLIMNNLNLS
SSISNSGRNAMTMNQNRKSTDSYFYTGKTTFGGSNLRKNIHRLSMTPYSPYARVNVKCIE
PMVIQRPPSTSGKNISQSTVDEDIPLSSVTQRILDRLDKAAAPISDAKSRISLSTLINNS
AKKFNTNRTPKLFDTPTPIFENHDRSHIDSSFKPMKYVLKPSLSSTYEQTTTSAAVDKSI
DDDIQKLNQIKQAEKELQKQQEKLQTKTFIEPALRNFASSSSGKITARDVKKGRKIDDVL
EMDNSHLKSLANVQPLATMTTGITLKPFSLKSSTSINNNSDKSNTFDIRSTCDTINVPNC
STINNEFSFKFSSPKLVASLSPVAVRPTFQEIGFSSPIQISKSKPVVQSESTTSTTTKSL
FDQFKHCIQSTNTWTCPICCIQNDNIDGDKCIACEEPNPNKKSSKDNQLTEETQRPESLN
FGDCKKLTQNSSLSSSLPSLNQLFKKDASKNWTCPTCSVSNNIEENRCISCEEPNPHKNK
KTSNNQLNNLAKFSFGSVSSDIDTKIVSVDENSSTKTKPSLFDVFKKKQSQDKQQWTCPT
CMVPNESNVNRCVSCEEPNPNQPVVSQTKSSTKTSFGFKFGSSNTSFQKDHPSREEGWQC
FYCKAMNKSDISGKNVCNECGKIKVMAATKDQVQKFYQTQTFKFGLSTNNTNKDVKAETK
FEKQDKTSTDIPTSSSSGGFKFGIPPSSTVSDSLTMTSPFSSSKTTVPFSSSSSSIVKPI
VSMRDTSSSLFSFGTTTTNSATDVSFEKTTKPLIDAVPAVPLSSSLSLFNFGTTTTNSAT
DVSFEKTTKPNTDTATAVPVSSSSNLFVFGVNSSKSATRSENKNGDESSNDNADKNITPF
GFNAISSTSSTDMKSSMATGLFNFGGAKQDSSKTSLPSSFSKDTSTSSMPSSSFTFGGAC
TSVTSTTTTTPTSTLFGKDLKFGSPITVPKIDPGPPIPKITISFAHPGTATTSSTAAGSV
GQSTSNTLFSFGSSNITINANPTPPSSIFGSSSMPTSFNFMGTNTSSNNNGSMGTSSLFT
FGAKPNNEPQPPLDKPAMVGFNFGASSNPLSFSGASAAATNNNPVMPSFNTATPSSTLFK
FGSQDPSNLSFQSFPTSKVESNNLSFTSSVLEPQQQQPDVQQQQPNSLFQFQSSNSVSNM
QQRPNQPRTIKKAKRRLR
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatgataatgaatccagaggaactatatatgataaaattcataatgaacga
ccaactttatcaagtttgtctgaacaacaaaagcaatcagaagaatcgaataattctgaa
acagcaacatcaaagtcgtattggacgaaaccaccgccaccaactttatcgtcatcatca
ggtgtcgaaaggagtatcaatactggtccaggctattcaagatcatcattgtactcaagt
gttaaaagattaaatctattcccaaaaagattagctgggaatgattcggatgtgatttat
aattcaaattcattcaaacgttttcgggcgaacaataataatatcgagaatctaactgat
tcaatacatgaaccatccatacgttcacgtgtaagtcatgtttcaacaccatcatcaaca
tcatcggttgctcttgggtatttgaccagtgaattcggccgaaaacaatatcccaaagca
cccttatctatcactggtcgtgattcaccatcattaatcatgaataatctcaatctatca
tcatcaataagtaatagtggtcgaaatgcaatgacaatgaatcaaaatcgtaaatcgaca
gattcatatttctatactggcaaaacgacattcggtggctcgaatcttcgtaaaaatatt
caccgattgagtatgacaccttattcgccttatgcacgcgttaatgttaaatgtattgaa
ccaatggtcatacaacgaccaccatcaacttcgggtaaaaatattagtcaatcgactgtt
gatgaagacataccattaagttcggtgactcaacgtattctggatcgattagataaagcg
gccgcgccaatatctgatgctaaatccaggatttccctttcaacattgataaataattca
gcaaaaaaattcaacacaaatagaacgccgaagttatttgatactcctacgcctattttt
gaaaatcatgaccgttctcatatagattcaagttttaagccaatgaaatatgttcttaaa
ccatcgctatcatcaacatatgaacaaacgacaacgtcggcggccgttgacaaatcgatt
gatgatgacattcaaaaattaaatcaaattaaacaagctgaaaaagaattgcaaaaacaa
caagaaaaattacaaacaaagacatttattgaaccagcattaagaaattttgcatcatca
tcatcgggaaaaattacagcacgtgatgtgaaaaaaggccgtaaaattgatgatgttctc
gaaatggacaattcacatcttaaatcattagccaatgtacagccattggccactatgaca
accggtataacgttgaaaccattttcgcttaaatcatctacatcaatcaataataatagt
gataaatctaatacatttgatatccgatccacatgtgatacgattaatgtaccaaattgt
agtacaattaacaatgaattttcatttaaattttcatcaccaaaattagtcgcttcactt
tctccagtggctgtgcggccaaccttccaggaaattggtttcagttcaccgatacaaata
agtaaatcgaaaccagtagtccaatcggaatcgacaacgtctacaacaacaaaatcattg
tttgatcaatttaaacattgtatacaatctaccaatacatggacatgtcctatttgttgt
atacagaatgacaatatagatggagataaatgtattgcatgcgaagagcctaatccgaat
aaaaaatcgtcaaaggataaccaattaacagaagaaacacaacgaccagaatctttgaat
tttggcgattgtaaaaaattgactcaaaattcctcattatcatcatcattgccttcattg
aatcaattgtttaaaaaagatgctagtaaaaattggacatgtccaacatgttctgtctca
aataatattgaagagaatcgttgcatttcatgtgaagaaccgaatccacataaaaataaa
aaaacatccaataatcagctaaataatttggccaaattttcatttggttcagtttcgtcc
gatattgataccaagatagtatccgtggatgagaattcatcaacaaaaactaaaccatcg
ttattcgatgtattcaaaaagaaacaatcacaagataagcaacaatggacatgtcccacc
tgtatggtaccaaatgaatcgaatgttaatcgatgtgtatcatgtgaagaacccaatcct
aatcaaccggttgttagccaaactaaatcatctactaagacgtcatttggatttaaattt
ggaagttcaaacactagtttccaaaaagatcatccatcaagggaagaaggatggcaatgt
ttttattgtaaagctatgaacaaaagtgacattagtggtaaaaatgtttgcaatgaatgt
ggtaaaattaaagtgatggcagctacaaaagatcaagtgcaaaaattttatcaaacgcaa
acattcaaatttggtctgtcaactaataacaccaacaaggatgttaaagctgaaactaaa
tttgaaaaacaagataaaacttcaactgacataccaacgtcatcttcaagtggtggattt
aaatttggaatacctccatcatctaccgttagcgattcactaactatgacatctccattt
tcatcgtcaaaaacgacagttccattctcgtcatcatcatcatcgatagtcaaacctatt
gtatcaatgagagacacatcatctagcttgttcagttttggaacaacaaccacaaattcg
gccactgatgtatcatttgaaaagacaacaaagccactcatcgatgctgttccagcagta
cctttgtcatcgtcacttagcttgttcaactttggaacaacaacgacaaattcggccact
gatgtatcatttgaaaagacaacaaagccaaataccgatactgctacagcagtacctgta
tcatcttcatcgaacttgttcgtatttggtgtaaattcatctaaatctgctaccaggtcc
gaaaataaaaatggcgatgaatcgtcaaatgacaatgccgacaagaacatcacacctttt
ggttttaatgcgatcagttcgacctcgtcgacagatatgaaatcatcaatggccactggt
ttatttaattttggtggtgctaagcaagattcctcaaagactagtctgccatcaagtttt
tcaaaagacacttctacgagctcgatgccttcatcttcattcacatttggtggagcatgc
acctctgtgacttctacgacgacaacaacacccacatcaaccctatttggtaaagatcta
aagtttgggtcaccaatcactgtgccaaaaattgatcctggtccaccgatacctaaaata
acaattagctttgctcatccgggcacagcaacaacatcgagtacggctgctggcagtgtt
ggccaatcaacatcaaatacgttgttttcatttggaagttcaaacataacgatcaatgcg
aatcctacgcctccgtcatccatttttggttccagttcgatgccaacaagttttaatttc
atgggaacaaataccagcagtaacaacaatggatctatgggtactagttctttatttacg
tttggggccaaaccaaacaatgaaccacaaccaccgttagataagcctgcaatggtcggt
tttaatttcggagcatctagcaatccattgagtttcagcggtgccagtgctgctgcgaca
aataataaccctgtgatgccttctttcaatactgctacaccatcatcaacattattcaaa
ttcggatcacaggatccttcaaatctaagttttcaatcgtttccaacgtctaaggtcgaa
agtaataatttatcctttacttcgtctgtacttgaacctcaacaacaacagccagatgtt
caacaacaacaaccgaatagtttatttcagtttcaatcctcgaattcagtaagcaatatg
caacaacgaccaaatcaaccaagaacaatcaaaaaagctaaaagacgccttagatga
DBGET
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