Dermatophagoides farinae (American house dust mite): 124492636
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Entry
124492636 CDS
T08043
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124492636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfr03041
]
124492636
Spliceosome [BR:
dfr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124492636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
PRP4
ANAPC4_WD40
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_Vps41
Nbas_N
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
124492636
NCBI-ProteinID:
XP_046911544
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MYNDNDIDYVKKQKIVHYGSLEDSVRMLQQSNQQQQPEPSTSSNINTSNQYFDLKPAPLL
NNDKQNALEELERKRKARQIAVSTDDIEVRAHLRHLNQPMCLFGEGPADRRERLRQLLAR
LGEDAIKKNKDEDRSQEEKEPSKTWYHVGSENLLKARQWIAEYSIPKAKERLKEARHYKQ
IPYEVREANNQELYKKLRSMEISCSQVADQRPISSCSFSPNGSLIATSSWSGLCKIWSLN
GLQLKYTLRGHNCNADDIAFHPRSTIDQPEEAVNLASCSVDGSVHLWNLGKEEPIHSLNG
HQPHRVSSIGFHPSGRFLATCCYDNSWRLWDLEYNEEILHQEGHSKPVHEIDFQRDGSVV
VTGGRDGFGRVWDLRTGRCIMFMDGHLKGVISVSFSPNGYQIVTGSEDNSVKIWNLRERK
LEYTVAAHTNIVSKVRFEHNLGNYIMTASYDNTIKLWAHPAWTPIKTLSGHDGKVMCVDV
SNDNNYLISCSFDRTFKLWEQQHL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtacaatgataatgatattgattatgttaaaaaacagaaaattgttcattatggaagt
ttggaagattcggttcgtatgttacaacaatcaaaccaacaacaacagccagaaccatca
acatcatcgaatatcaatacatcgaatcaatattttgatctcaaaccagcaccattattg
aataatgataaacaaaatgcattggaagaattggaacggaaacgtaaagcacgacagatt
gctgtctctacggatgatatcgaagtacgtgcccatcttcgacatctaaatcaaccgatg
tgtttgttcggcgaaggccctgctgatcgtcgtgaacgtcttcgacaattattggcaagg
ctcggtgaagatgctatcaaaaagaataaagatgaagatcgaagtcaagaggaaaaagaa
cctagtaaaacttggtatcatgttggaagtgaaaatttattgaaagctcgtcaatggatt
gccgaatattcgataccgaaagcaaaagaacgattaaaagaggcaagacattataaacaa
atcccatacgaagttcgtgaagcaaacaatcaggaactgtataaaaaattacgatcaatg
gaaatcagctgttcacaagtggccgatcaacggcccatttctagttgttcattcagcccg
aatggttcgctaattgcgacatcatcatggagtggtctctgtaaaatatggtcactgaat
ggattacagctgaaatatacacttcgtggacataattgtaatgctgatgacattgcattc
catcctcgatcgacaattgatcagccagaagaagctgtaaatctagcatcatgtagtgta
gatggttctgtacatctttggaatcttggcaaagaagaacctatacattcattgaatggt
catcaaccacatcgtgtgagtagtattggttttcatccatctggacgatttctcgccact
tgttgttatgataattcatggcgtttatgggatcttgaatataatgaagaaattctacat
caagaaggtcattcaaaacctgtacatgaaattgattttcaacgtgatggtagtgttgtt
gttacaggtggccgtgatggttttggccgtgtttgggacctacgaaccggacgttgtata
atgtttatggatggacatctcaaaggtgttatatcggtatcgttctcaccgaatggttat
caaattgtaactggaagtgaagataatagcgttaaaatatggaatctacgtgaacgtaaa
ttagaatatactgttgctgcacatacgaatattgtttcaaaagtacgtttcgaacataat
ttaggaaactatataatgacagcatcctatgataatacgattaaattgtgggcacatcca
gcatggacaccgatcaaaacacttagtggtcatgatggtaaagtgatgtgtgtggatgta
tcaaatgataataattatctaatatcatgttcatttgatcgaacgtttaaactatgggaa
caacaacatctttga
DBGET
integrated database retrieval system
