Dermatophagoides farinae (American house dust mite): 124492995
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Entry
124492995 CDS
T08043
Symbol
Msh6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124492995 (Msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfr03400
]
124492995 (Msh6)
DNA repair and recombination proteins [BR:
dfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
124492995 (Msh6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_II
MutS_IV
RickCE_cat
Helicase_C_4
SMIM7
Motif
Other DBs
NCBI-GeneID:
124492995
NCBI-ProteinID:
XP_046911981
LinkDB
All DBs
Position
1:9053523..9057669
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AA seq
1298 aa
AA seq
DB search
MKKSPFRGCQTPKQNNTLLNYFSRTTPKSVEKCDSTIQSKSKDDVSDKRIELSDRSNKSE
NNCKTATRNCLEKETPSKRKTEQRASDDDDDKIGLIKSNDSMQKNKRFKRIFLSSDDDDD
DNENVSKNDGDDYQPETESSDVDFISENSDSNFGNDDDDEVTPPSKKSKKNCKSSSKNVK
ATKSNKYKKDADDFIFDDMIEISDDSQNLSNLKLKTKKILDTNSADSITTLKMNEDKSIA
FKFIPVDPIVHEKDSVFDDENLAENANVANNEYAILDNEKTVKKSSYSSLSNVDKPTSSE
QATNTQWPHLSYKFLQPKYIKDLNGNPMLINDELNVNYDPSTLYVPIEFLEQQTPAMRQW
WELKSRNYDTILFFKMGKFYEFFHMDAVSCAKELKILFMRGNNAHAGFPEKSYKKYADAL
VQKGYKVARVEQTETPEMVTERCKKMKRTTKFDKVVKREICRISSIGTRYMSDIDADTFL
DYTSYLMAFTCKEFTKSSFDLGVCFVDVSIGQFFLSQFRDDRNNSKLRTLISHYSPVEII
IEESNKLCKLIETICPAARVQKLKRFKSASQTLKFIYEKNLWSNIATDFRNEILDPSDVI
QQSARTEFELATVSMGAIIDYLEKSLIIDDIMSMGQFQVYRPPEFNSVMTKLPDHMIMDS
MTMKNLEILESLTHDDMSKTSTLFKIINHCQTAFGKRMLRTWICQPLCGLSNGLEMRREA
VRDLAENIDIAGYHKQWKEMLKKIPDLDRLLTQIHSQSSLKRSKDHPDARAILFESDIYR
IRRIKTFLDTIAGFEQISKIVENIQSNLDLFKSKYIHQLMTYIEDGGLFPRFDDKIQFFR
QSFYEEKVRQDGHFIPDKGVDDEYDQACEMISNITKKFDDYLNEQKLFFKTRINYVNALK
NRFLLEVPDSCESKISKWQENYELKSSRKGYKRYHTTKLIEMIEQLEQAENEKQLLLGDI
FRRLLARFDQDYKIWRQAISCISQFDALLSLSNTRQLFESNGSNSCLPEFIWDHQDQSII
RAKDLRNAFLVINNTVIPNDIELMGETLILTGPNMGGKTTLMRSVGLLVILAQIGSYVPA
SECQLTPVDRIFTRIGAYDIVLENESTFMVELSEALSIMKYASKLSLALIDELGSGTSTF
DGTAIASAIIFNLAETIKCRTLFSTHYHSILGELNGKANIKLGYMSYMIENENDKDPTDE
NIVFLYKLQPGICNKSYGFNVAKLAGIPNEIIRRAHQHSQQFELECRIKSLLNWFQQRKK
QHNKSMISDNDRVEAEENCQQLLSTIRMLRTFIGENNP
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcaccatttcgtggttgtcaaacacctaaacagaataatacattgttgaat
tatttttctcgtactacaccgaaatctgtggaaaaatgtgactcaaccatccaatcgaaa
tcaaaggatgatgtatcggataaacgaattgaactttctgatcgatcaaataaaagtgaa
aataattgcaaaactgctacacgtaattgtttggaaaaagaaacaccttcaaaacgaaaa
actgaacaacgagcatcggatgatgatgatgataaaattggcctgattaaatcgaatgat
tcaatgcaaaagaataaacgattcaaacgaatttttctcagttcagatgatgatgatgat
gataacgaaaatgtgagcaagaatgatggagatgattatcaaccagaaacagaatcttct
gacgttgattttatttccgaaaatagtgattcaaattttggaaacgacgatgatgatgaa
gtgacaccaccatcaaaaaaatcaaaaaagaattgcaaatctagttcgaaaaatgtgaaa
gcaacgaaaagtaataaatacaaaaaagatgctgatgatttcatctttgatgatatgatt
gaaatctcagatgattctcagaatctatcgaatctgaaattgaaaacgaaaaaaattttg
gatacaaattcagccgattcgataacaacactgaaaatgaatgaagataaaagtattgca
tttaaattcattccagtcgatccaatcgtccatgaaaaggatagtgtttttgatgatgaa
aatttggccgaaaacgcaaatgttgccaataatgaatatgccattttggataatgaaaaa
actgtcaaaaaatcatcatattcatcattatcgaatgtggataaaccaacctcatcggag
caagcaacaaatacacaatggccacatttatcctataaatttttgcaaccaaaatacata
aaagatttgaatggaaatccaatgcttatcaatgatgaattgaatgtcaattatgatcca
tcaacattgtatgtgccgattgaatttcttgaacaacaaacaccagcaatgcgtcaatgg
tgggaattgaaatcacgaaattatgatacaattctattctttaagatgggaaaattttat
gaatttttccatatggatgctgtatcatgtgctaaagaattgaaaatattatttatgcgt
ggtaataatgcacatgctggttttcccgaaaaaagctataaaaaatatgccgacgcattg
gtacagaaaggatacaaggttgcacgggttgaacaaaccgaaacaccagaaatggttacc
gaacgttgtaaaaagatgaaacgtacaacaaaatttgacaaggttgtcaaacgtgaaatc
tgccgtatatcatcgatcggcacccgttacatgtccgatattgatgccgatacatttctt
gattatacttcgtatttaatggctttcacttgtaaggaatttacaaaatcttcattcgat
ttgggcgtctgttttgtagatgtatctattggacaatttttcctctcacaattccgtgat
gatcgtaacaattccaaacttcgtacattgatatcacactattcaccagtggaaatcatt
attgaagaatccaacaaattatgcaaattgatcgaaacaatttgcccagctgcacgtgtt
cagaaattgaaacgatttaaatcggctagtcaaactttgaaatttatttatgaaaaaaat
ctatggtcaaatattgctaccgattttcgaaacgaaattctcgatccatccgatgtgatt
caacagtctgcccgaacagaattcgaattggccaccgtttcaatgggtgccataattgat
tatttggaaaaatcattgataattgatgatatcatgtcaatgggacagttccaagtatat
cgtccaccagaatttaactcagtaatgactaaattgcccgatcatatgattatggattca
atgacgatgaaaaatttggaaattcttgaatcattaactcatgacgatatgagtaaaaca
tccactttgttcaaaattattaatcattgtcaaactgcattcggtaaacgaatgcttaga
acttggatatgtcaaccattatgtggcttaagtaatggattagaaatgagacgtgaagct
gtacgagatttggccgaaaatatcgacattgctggctaccacaaacaatggaaagaaatg
ctaaaaaagattcctgatctggatcgtttattgacacagattcattcacaatcatcgctt
aaacgttcgaaagatcatccggatgcacgtgccatactatttgaatcggacatttatcgt
atacgacgaattaaaacttttctcgacactattgctggttttgaacagatttcgaaaatt
gttgagaacattcaatcaaatttagatttattcaaatccaaatacattcaccaattgatg
acatatatagaagatgggggattgtttcctcgattcgatgataaaattcaattttttcga
caatcattttatgaagaaaaagttcgtcaagatggccatttcataccggacaaaggtgtc
gatgatgagtatgatcaggcctgtgaaatgatttcaaatattacaaagaaatttgatgat
tacctcaatgagcagaaattatttttcaaaacacgtatcaactatgtgaatgcattgaag
aatcgtttcctattggaagtaccggattcatgtgaatcgaaaatttcaaaatggcaagaa
aattatgaattgaaaagttcacgtaaaggttataaacgttatcatacgactaaattaatc
gaaatgattgaacagctggaacaggctgaaaatgaaaaacaattgcttcttggtgatata
tttcgtcgtcttttagctcggttcgatcaagattataagatttggcgccaagcaatttca
tgtatttcacaatttgatgccttattgtcattatcaaacacacgacaattgtttgaatcg
aatggttcaaattcttgtttaccagaattcatttgggatcatcaagatcaatcgattata
cgtgcaaaagatttgcgtaatgctttcctagtgatcaacaatacagtcataccaaacgat
attgaattaatgggtgaaacattgattttaaccggcccaaatatgggtggtaaaactaca
ttgatgcgttcggttggtttgttggtcattctggcacaaattggttcctatgttccggct
agtgaatgtcagctaacacctgtggatcgaatattcacccgtatcggtgcttatgatatt
gttttggaaaatgaaagtacttttatggtcgaactaagcgaagccttgtcgattatgaaa
tatgcgtcgaaattatcattggcattgatcgatgaacttggtagtggaacatcaacattt
gatggtacagctattgcttcggccatcatttttaatctagccgaaacaattaaatgtcga
acattattctcaacacattatcattccattctgggtgaattgaatggcaaagctaacatt
aaacttggctacatgtcttatatgattgagaatgaaaatgacaaggatccaaccgatgag
aatattgtctttctatataaactacaaccaggtatttgtaataaaagctatggatttaat
gttgctaaattggctggcataccaaatgaaattattcgccgtgcacatcaacattcacaa
caatttgagctggaatgccgtattaaatcattgttaaattggttccagcaacgaaaaaaa
cagcataataaatcaatgattagcgataatgatcgtgttgaagctgaagaaaattgtcaa
caacttttatcaacaattcgaatgttgcgaacatttattggagagaataatccataa
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